DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6254 and CG4282

DIOPT Version :9

Sequence 1:NP_649983.2 Gene:CG6254 / 41244 FlyBaseID:FBgn0037794 Length:634 Species:Drosophila melanogaster
Sequence 2:NP_611118.3 Gene:CG4282 / 36825 FlyBaseID:FBgn0034114 Length:652 Species:Drosophila melanogaster


Alignment Length:664 Identity:135/664 - (20%)
Similarity:234/664 - (35%) Gaps:180/664 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 CRLCSKEHPTNQNVFFREAKQNSWASTMAMTIGKYFWVDIKREDELSNFLCSECFTLMDCLIEFS 86
            |.||..|:|.....:............:...:.::|.|.|.:|.:  ..:|..|:.::.      
  Fly     7 CLLCMCEYPAMMGDYIDVHSARGDQLEVTTIVNQHFPVQISKESD--ERICGRCWKIVS------ 63

  Fly    87 ERVRKVQILFSKLQLLQSNNLMDYEKIREDCGVATDGWKHIMLGAVDESLPQNDEVFISEEQPIV 151
                                  |:..:            |..:.|...|| |..:|.:.|:.|:.
  Fly    64 ----------------------DFHTL------------HEFVSAAQSSL-QETKVALMEDDPLT 93

  Fly   152 CQTETSSKMKSEILMIPNFLVEKQCLQEKQDFPKEEDVIEEEM--------------------QI 196
            .:|.:..::..........:.|.|.|..:..|..|..:.|.|:                    |:
  Fly    94 QETTSFPEIIKLATQEEEGVTEPQELGGRNFFYPEIKIEEHELDTLPRIEILERSANTQENQDQL 158

  Fly   197 SGVEEEI-----------LEEDVEEDLAEEEVETV------------------------EEEIDT 226
            .|....:           :::|.:||..||..|..                        :.::|.
  Fly   159 EGAARRLRKRLKAEDGSSVDKDKDEDGVEETAEPAPPKKRRGRPRKSDAAVAPPQKPKEDIQLDL 223

  Fly   227 VGEEVEAVEEELETQDATDCLVEEVEHMTE-----DRYIEESQIIEESQVSDFNMETYEIV---- 282
            ..||::...:| ||.....|||.. ::.:|     |.:..:|....::...:|.:.....|    
  Fly   224 KAEELDEFVDE-ETDPDFSCLVPS-DNSSEDDGGSDGFDSDSDFELDNGKQEFAVLPKRTVVRPK 286

  Fly   283 QHNPQKEPVETKDTV--ESIESNEDTQE---------------------------DISREH-VTD 317
            ::..:.:|.|.|..:  |.:|..:..||                           ::.|.| :|.
  Fly   287 KYKKRTKPAEPKVRMSRELLEQRKKQQEEYDVIIAKFFTSVLPCAICNLLVHNFTEMQRHHRLTH 351

  Fly   318 EEDE---------------------ISEVPAMYKCNICKKPYKKPKAYKRHMEEVHNTVADDLPQ 361
            :.|.                     :...|..:||::|:|.::..:..:.| ::||...|..| .
  Fly   352 QVDPGYMMCCGRKFTQRKVLAEHVLVHWNPDHFKCSVCEKSFQNSRHLESH-QQVHMDPAVKL-T 414

  Fly   362 LECNQCKLCFPTVAQLHAHH-RTHVRAKPKTD--NCCPHCEKRFTTSGTLKRHIEGIHNQIKPYV 423
            ..|:.|...|.:...:..|. ..||   ||::  ..|..|.|:|.|...||.|:..:|:.....:
  Fly   415 FSCDLCSKTFLSKTAIDYHKLNKHV---PKSEFKFTCSECNKKFLTERKLKNHMSSMHDPESTII 476

  Fly   424 CDLCGKSFNYITGLKDH-KLVHTDECPFE-----CPVCKRGFKNNARLKIHLDT---HSAEIYEC 479
            ||.|||.......||.| :|:|:|:...|     |.:|....|....||.|:.:   .||..:.|
  Fly   477 CDKCGKQMRTKIILKKHQELMHSDKPRPEPELQQCQICGAWLKGMTGLKQHMKSIHVESAGEHRC 541

  Fly   480 TVCGLKLKTRRTFNKHKLVHSD--TRQFKCEVCGSAFKRSKTLKAHLILHTGIRPYKCNFCGRDF 542
            .:|.......|...:| :.|:.  .|:|||.:|..||||.:.||.|...|||...|.|..|...|
  Fly   542 HICAKVSPNARALRRH-IYHNHECERKFKCTMCEKAFKRPQELKEHTSTHTGEVLYTCPNCPMTF 605

  Fly   543 ANGSNCRSHKRQAH 556
            ...:|...|:::.|
  Fly   606 FCSANMYKHRQRLH 619

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6254NP_649983.2 zf-AD 21..99 CDD:285071 11/76 (14%)
COG5048 <353..554 CDD:227381 65/214 (30%)
C2H2 Zn finger 364..384 CDD:275368 4/20 (20%)
C2H2 Zn finger 395..416 CDD:275368 8/20 (40%)
C2H2 Zn finger 424..444 CDD:275368 9/20 (45%)
C2H2 Zn finger 452..472 CDD:275368 6/22 (27%)
C2H2 Zn finger 479..499 CDD:275368 4/19 (21%)
C2H2 Zn finger 507..527 CDD:275368 9/19 (47%)
zf-H2C2_2 520..544 CDD:290200 10/23 (43%)
C2H2 Zn finger 535..553 CDD:275368 5/17 (29%)
CG4282NP_611118.3 zf-AD 7..81 CDD:285071 16/116 (14%)
FYDLN_acid <191..268 CDD:302856 13/78 (17%)
C2H2 Zn finger 330..351 CDD:275368 2/20 (10%)
C2H2 Zn finger 360..378 CDD:275368 0/17 (0%)
LIM 361..>400 CDD:295319 5/38 (13%)
C2H2 Zn finger 386..406 CDD:275368 4/20 (20%)
zf-C2H2_8 389..465 CDD:292531 22/80 (28%)
C2H2 Zn finger 417..438 CDD:275368 4/20 (20%)
C2H2 Zn finger 448..465 CDD:275368 7/16 (44%)
C2H2 Zn finger 477..498 CDD:275368 9/20 (45%)
C2H2 Zn finger 511..532 CDD:275368 6/20 (30%)
C2H2 Zn finger 541..562 CDD:275368 5/21 (24%)
C2H2 Zn finger 570..590 CDD:275368 9/19 (47%)
C2H2 Zn finger 598..619 CDD:275368 5/20 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45471725
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24403
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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