DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6254 and Zfp616

DIOPT Version :10

Sequence 1:NP_649983.2 Gene:CG6254 / 41244 FlyBaseID:FBgn0037794 Length:634 Species:Drosophila melanogaster
Sequence 2:NP_001171041.1 Gene:Zfp616 / 327963 MGIID:3650906 Length:987 Species:Mus musculus


Alignment Length:643 Identity:152/643 - (23%)
Similarity:257/643 - (39%) Gaps:149/643 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSDILAETQAANRDSTIWHQWCRLCSKEHPTNQNVFFREAKQNSWA-----STMAMTIGKYFWVD 60
            ||:..:::....:|.|.|..:                    :|.|.     .::.:.:....|. 
Mouse   265 MSNHCSQSSLQQQDHTTWSLY--------------------KNDWQDDILNDSLILQVYNRMWT- 308

  Fly    61 IKREDELSNFLCSECFTLMDCLIEFSERVRKVQILFSKLQLLQS---NNLMDYEK--IREDCGVA 120
               :.:.:.:.|.   |..:.||| |..:.|..:...|.||.|:   |.::::..  |:.|....
Mouse   309 ---KGDFNKYTCD---TYRNALIE-SLYLEKDNMKHIKRQLSQAPGYNKVLNFNSNVIQHDSNHN 366

  Fly   121 TDGWKHI---MLGAVD-ESLPQNDEVFISEEQPIVCQTETSSKMKSEILMIPNFLVEK---QCLQ 178
            ..|.:.:   :.|..: ::|.::..:.: ||:|...:|......||..||:  |....   :|:|
Mouse   367 GKGIQKVKVHLYGIFNIQNLLRHSNLSV-EEKPSKYKTPEKCSNKSSGLMV--FQARGKPWKCVQ 428

  Fly   179 EKQDFPKEEDVIEEEMQISGVE-----EEILEEDV--EEDLAEEEVETVEE--EIDTVGEEVEAV 234
            ..:.| .:...::...:|..|:     :|.|:...  .:..|...:.|.:|  :.:..||..   
Mouse   429 CGKSF-AQYSALQNPHRICTVKKLYSCKECLKSFTWFSKLQAHHRIHTTQELYKSNKCGESF--- 489

  Fly   235 EEELETQDATDCLVEEVEHMTED---------RYIEESQIIEESQVSDFNMETYEIVQHNPQKEP 290
                 ||.:...:.:.:.| |.|         :|...|..:::.|            :.:.:.:|
Mouse   490 -----TQSSNLQVYQRIHH-TGDKPYKCNECGKYFTHSSSLKDHQ------------RIHARHKP 536

  Fly   291 VETKDTVESIESNEDTQEDISREHVTDEEDEISEVPAMYKCNICKKPYKKPKAYKRHME------ 349
            .:..:..:|...:.|.:... |.|..|:.         ||||.|:|.:.:....|||..      
Mouse   537 YKCNNCGKSFIKSSDLKGHY-RIHTGDKP---------YKCNNCRKSFTQSSGLKRHYRIHTGDK 591

  Fly   350 -----------------EVHNTVADDLPQLECNQCKLCFPTVAQLHAHHRTHVRAKP-KTDNC-- 394
                             :||..:.......:||:|...|...:.|..|||.|.|.|. |.:||  
Mouse   592 PYKCNECGKYFTQSSNLQVHQRIHTKDKPYKCNECGKYFAHSSSLKVHHRIHTRNKTYKCNNCGK 656

  Fly   395 ----------------------CPHCEKRFTTSGTLKRHIEGIHNQIKPYVCDLCGKSFNYITGL 437
                                  |..|.|.||.|.:||.| ..||.:.|||.|:.|||||...:.|
Mouse   657 SFIRSSDLKRHYRIHTGNKPYKCNDCGKYFTHSSSLKGH-HRIHTRDKPYKCNNCGKSFRQSSSL 720

  Fly   438 KDHKLVHTDECPFECPVCKRGFKNNARLKIHLDTHSAE-IYECTVCGLKLKTRRTFNKHKLVHSD 501
            |.|..:||.:.|::|..|.:.|..::.||.|...|:.: .|:|..||...........|:.:|:.
Mouse   721 KRHYRIHTGDKPYKCNECGKYFACSSSLKRHHRIHTGDKPYKCNECGKYFAQSSNLQVHQRIHTK 785

  Fly   502 TRQFKCEVCGSAFKRSKTLKAHLILHTGIRPYKCNFCGRDFANGSNCRSHKRQAHPKE 559
            .:.:||..||..|.||.:||.|..:|||.:|||||.||:.||..||.:.|:| .|.|:
Mouse   786 DKPYKCNECGKYFARSSSLKNHHRIHTGDKPYKCNECGKYFAQSSNLQVHQR-IHTKD 842

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6254NP_649983.2 zf-AD 21..99 CDD:462262 10/82 (12%)
COG5048 <353..554 CDD:227381 78/226 (35%)
C2H2 Zn finger 364..384 CDD:275368 8/19 (42%)
C2H2 Zn finger 395..416 CDD:275368 9/20 (45%)
C2H2 Zn finger 424..444 CDD:275368 9/19 (47%)
C2H2 Zn finger 452..472 CDD:275368 6/19 (32%)
C2H2 Zn finger 479..499 CDD:275368 4/19 (21%)
C2H2 Zn finger 507..527 CDD:275368 9/19 (47%)
C2H2 Zn finger 535..553 CDD:275368 9/17 (53%)
Zfp616NP_001171041.1 C2H2 Zn finger 735..755 CDD:275368 6/19 (32%)
C2H2 Zn finger 763..783 CDD:275368 4/19 (21%)
C2H2 Zn finger 791..811 CDD:275368 9/19 (47%)
C2H2 Zn finger 819..839 CDD:275368 10/20 (50%)
C2H2 Zn finger 847..867 CDD:275368
C2H2 Zn finger 875..895 CDD:275368
C2H2 Zn finger 903..923 CDD:275368
C2H2 Zn finger 931..951 CDD:275368
C2H2 Zn finger 959..979 CDD:275368
C2H2 Zn finger 426..446 CDD:275368 3/20 (15%)
C2H2 Zn finger 454..474 CDD:275368 3/19 (16%)
C2H2 Zn finger 483..502 CDD:275368 4/26 (15%)
C2H2 Zn finger 511..531 CDD:275368 3/31 (10%)
C2H2 Zn finger 539..559 CDD:275368 3/20 (15%)
COG5048 562..986 CDD:227381 93/292 (32%)
C2H2 Zn finger 567..587 CDD:275368 7/19 (37%)
C2H2 Zn finger 595..615 CDD:275368 2/19 (11%)
C2H2 Zn finger 623..643 CDD:275368 8/19 (42%)
C2H2 Zn finger 651..671 CDD:275368 2/19 (11%)
C2H2 Zn finger 679..699 CDD:275368 9/20 (45%)
C2H2 Zn finger 707..727 CDD:275368 9/19 (47%)
Blue background indicates that the domain is not in the aligned region.

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