DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6254 and Zfp827

DIOPT Version :10

Sequence 1:NP_649983.2 Gene:CG6254 / 41244 FlyBaseID:FBgn0037794 Length:634 Species:Drosophila melanogaster
Sequence 2:XP_038954094.1 Gene:Zfp827 / 291940 RGDID:1560620 Length:1352 Species:Rattus norvegicus


Alignment Length:903 Identity:171/903 - (18%)
Similarity:277/903 - (30%) Gaps:365/903 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 HQWCRLCSKEHPTNQNVFFREAKQNSWASTMAMTIGKYFWVDIKREDELSNFLCSEC-------F 76
            || |.||.          ||.|::::..|.|.:.         :.:|....|.|..|       |
  Rat   399 HQ-CPLCP----------FRCARKDNLKSHMKVH---------QHQDRGETFQCQLCPFTSSRHF 443

  Fly    77 TL---MDCLIEF--SERVRKVQILFSKLQ-------------------------LLQSNN----- 106
            :|   |.|...|  :|...|.:||...::                         ::.||.     
  Rat   444 SLKLHMRCHQHFLRTEAKVKEEILDPDVKGSPHLSDSGCLGQQREGGGTELVGTVMTSNTPERTG 508

  Fly   107 --------LMDYEKIREDCGVATDGWKHIMLGAVDESL----PQNDEVFISEEQPIVCQTETSSK 159
                    |:..|:.:||.|:.|.    ..|.|.|.|.    |::...|:......:...:.|.|
  Rat   509 QGGAGVAPLLVKEEPKEDNGLPTS----FTLNAADRSANHTKPKDPSEFVPNSAAALFSQDISVK 569

  Fly   160 MKSEILMIPNFLVEKQCLQ---EKQDFPKEEDVI-------------EEEMQISGVEEE------ 202
            |.|:.||..:...:|:.:.   :.::.||||:.:             |.|:....:.|:      
  Rat   570 MASDFLMKLSAANQKEPMNLNFKVKEEPKEEETLSMPLPRSSYAFSPEPEVATPSISEDPLTPQE 634

  Fly   203 ----ILEEDVEEDLAEE-----EVETVEE-EIDTVGEEVEAVEEELETQDATDCL---------- 247
                :|..|:....|.|     ..|:.:| ::.||.||    ..|::.||:...:          
  Rat   635 GKGNVLRRDMSAKAASELLMKLSAESYKETQVVTVKEE----PMEVDIQDSPASISPSRNVGYST 695

  Fly   248 ------VEEVEHMTEDRYIEE----SQIIEESQVSDFNMETYEIV--QHNPQKE--------PVE 292
                  .|.::.:.|.|...|    ||.|.....|:...:..|.|  :||..||        |..
  Rat   696 LMGREKTEPLQKLPEGRVPPERNLFSQDISVKMASELLFQLSEKVSKEHNHTKENTMRTTTSPFF 760

  Fly   293 TKDTVESIESNEDTQEDISREHV------TDEEDEI-----SEVPA------MYKCNICKKPYKK 340
            ::||........::::.:..|.|      ..|.|:|     :.:|:      ::.|::|.|.:.:
  Rat   761 SEDTFRQSPFTSNSKDLLPGEPVLHGRVSAPETDKIVLEAGNGLPSWKFSDQLFPCDVCGKVFGR 825

  Fly   341 PKAYKRHMEEVHNTVADDLPQLECNQCKLCFPTVAQ----LHAHHRTHVRAKPKTDN-------- 393
            .:...||: .:| ||....|:....:|.|| |..|:    |:.|...|......||.        
  Rat   826 QQTLSRHL-SLH-TVLVSPPEERKYKCHLC-PYAAKCRANLNQHLTVHSVKLVSTDTEDIVSAVT 887

  Fly   394 ---------------------------------------------CCPHC--------------- 398
                                                         ||..|               
  Rat   888 SEGSDGKKHPYYYSCHVCGFETELNVQFVSHMSLHVDKEQWMFSICCTACDFVTMEEAEMKSHIG 952

  Fly   399 ----------------------------------------------------------------- 398
                                                                             
  Rat   953 TKHTGDDRKTPSESNSPSSSSLSTLSDSANGKDDSDSSQKNKGGNNLLVISVVPGSQPSLNNEEK 1017

  Fly   399 -EKRF---------TTSGTLKRHIEGIHNQIKPYVCDLCGKSFNYITGLKDHKLVHTDECP---F 450
             ||.|         .|....:||:: ||...:.:.||:|.|.......|.:||..||  .|   .
  Rat  1018 PEKGFECVFCNFVCKTKNMFERHLQ-IHLITRMFECDVCHKFMKTPEQLLEHKKCHT--VPTGGL 1079

  Fly   451 ECPVCKRGFKNNARLKIHLDTHSAEIYECTVCGLKLKTRRTFNKHKLVHSDTRQFKCEVCGSAFK 515
            :||.|.......|.::.||.||....|:|.:|......:.....|...|.....:||:.||...|
  Rat  1080 KCPFCIYSTNRPAAMECHLKTHYKMEYKCRICQTVKANQLELETHTREHRLGNHYKCDQCGYLSK 1144

  Fly   516 RSKTLKAHLILHTGIRPYKCNFCGRDFANGSNCRSHKRQAH-PK--------------------- 558
            .:..|..|:.:|||.||:.|:.|........|...||:..| |:                     
  Rat  1145 TANKLIEHVRVHTGERPFHCDQCSYSCKRKDNLNLHKKLKHAPRQTFSCGECLFKTTHPFVFSRH 1209

  Fly   559 -------ELAEEEARGVTRSTLLPMLDELTIASKLLKTPAGP----CKVKGSRPKAAP 605
                   |..||:.:|::.::               :.||||    ..|.|.|...:|
  Rat  1210 VKKHQSGEGPEEDRKGLSPAS---------------REPAGPGAPLLVVGGGRSLLSP 1252

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6254NP_649983.2 zf-AD 21..99 CDD:462262 21/89 (24%)
COG5048 <353..554 CDD:227381 64/350 (18%)
C2H2 Zn finger 364..384 CDD:275368 7/23 (30%)
C2H2 Zn finger 395..416 CDD:275368 8/110 (7%)
C2H2 Zn finger 424..444 CDD:275368 7/19 (37%)
C2H2 Zn finger 452..472 CDD:275368 6/19 (32%)
C2H2 Zn finger 479..499 CDD:275368 3/19 (16%)
C2H2 Zn finger 507..527 CDD:275368 6/19 (32%)
C2H2 Zn finger 535..553 CDD:275368 4/17 (24%)
Zfp827XP_038954094.1 COG5048 352..>440 CDD:227381 14/60 (23%)
C2H2 Zn finger 373..393 CDD:275368
C2H2 Zn finger 401..421 CDD:275368 8/29 (28%)
C2H2 Zn finger 432..452 CDD:275368 5/19 (26%)
C2H2 Zn finger 816..836 CDD:275370 5/20 (25%)
C2H2 Zn finger 850..870 CDD:275370 7/20 (35%)
C2H2 Zn finger 1024..1044 CDD:275368 3/20 (15%)
C2H2 Zn finger 1052..1072 CDD:275368 7/19 (37%)
C2H2 Zn finger 1081..1101 CDD:275368 6/19 (32%)
C2H2 Zn finger 1108..1128 CDD:275368 3/19 (16%)
zf-H2C2_5 1134..1158 CDD:404746 8/23 (35%)
C2H2 Zn finger 1136..1156 CDD:275368 6/19 (32%)
zf-H2C2_2 1149..1173 CDD:463886 9/23 (39%)
C2H2 Zn finger 1164..1183 CDD:275368 5/18 (28%)
C2H2 Zn finger 1193..1213 CDD:275368 0/19 (0%)
Blue background indicates that the domain is not in the aligned region.

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