DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6254 and Zfp407

DIOPT Version :9

Sequence 1:NP_649983.2 Gene:CG6254 / 41244 FlyBaseID:FBgn0037794 Length:634 Species:Drosophila melanogaster
Sequence 2:NP_001028513.2 Gene:Zfp407 / 240476 MGIID:2685179 Length:2246 Species:Mus musculus


Alignment Length:739 Identity:178/739 - (24%)
Similarity:276/739 - (37%) Gaps:214/739 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 VDIKREDELSNFLCSE----CFTLMDCLIEFSERVRKVQILF----SKLQL---LQSNNL----M 108
            |.:..|.| |||  ||    |.||...|:: .:.::..:|:.    |.|.|   |||.||    :
Mouse  1140 VTVVTEQE-SNF--SEGHSFCETLQQPLVK-DKSMKPREIVSPNTPSNLSLPGCLQSENLASSAV 1200

  Fly   109 DYEKIREDCGVATDGWKHIMLGAV-DESLPQNDE---VFISEEQPI---VCQTE-----TSSKMK 161
            |.|..:::..|         |.|| |.|.|..||   |..|||:.:   .|..:     ::....
Mouse  1201 DCETAKKNRDV---------LDAVGDRSTPCEDEGGSVDDSEEKILDKSPCPGDPDGGHSAESTS 1256

  Fly   162 SEILMIPNFLVEKQ--------CLQEKQDFP--KEEDVIE-EEMQISGVEEE--ILEEDVEEDLA 213
            |.::.||...::..        |.|..:|..  :...::| :|:.|:..||.  |||||......
Mouse  1257 SVVMKIPREQLDLDGGGQNKVGCEQTSEDLKDVQANPILENKEILINSQEEAEVILEEDAPTSNG 1321

  Fly   214 EEEVETVEE---EIDTVG------------------EEVEAVEEELETQDATDCLVEEV-----E 252
            ..:...|.|   .||..|                  |:.|.||:..|...||...|.|:     .
Mouse  1322 TADSNDVYETIISIDDKGQTMYSFGRFDSSIIRIKTEDGELVEQPEEGLTATGGRVSELPLKDCA 1386

  Fly   253 HMTEDRYIEESQIIEESQV------------SDFNMETYEIVQHNPQKEPVETKD-----TVESI 300
            ...:.:.:|.....|.:::            |..|:       |...|.|.:.|.     ..:|.
Mouse  1387 QGLKKKKVEGGSFGESTRIRCDDCGFLADGLSGLNV-------HIAMKHPTKEKHFHCLLCGKSF 1444

  Fly   301 ESNEDTQEDI-SREHVTDEEDEISEVP---AMYKCNICKKPYKKPKAYKRH--------MEEVHN 353
            .:..:..:.: |..|:.:|:..:.|:|   |.:||..|.:|:...:....|        :.||:.
Mouse  1445 YTESNLHQHLASAGHMRNEQASVEELPEGGATFKCVKCTEPFDSEQNLFLHIKGQHEELLREVNK 1509

  Fly   354 TVADDLPQL-------ECNQCKLC------FPTVAQLHAHHRTHVRAKP-KTDNC---------- 394
            .:.:|..|:       :.|.||.|      ..::|.| ||.|||..:|| |...|          
Mouse  1510 YIVEDTEQINREREENQGNVCKYCGKMCRSSNSMAFL-AHIRTHTGSKPFKCKICHFATAQLGDA 1573

  Fly   395 --------------CPHCEKRFTTSGTLKRHIEGIHNQIKP----YVCDLCGKSFNYITGLKDHK 441
                          |..|...|.....|..|:.|.|....|    :.|.||.:||.....|.:|.
Mouse  1574 RNHVKRHLGMREYKCHVCGVAFVMKKHLNTHLLGKHGVGTPKERKFTCHLCDRSFTEKWALNNHM 1638

  Fly   442 LVHTDECPFEC--PVCKRGFKNNARLKIHLDTHSAE-IYECTVCGLKLKTRRTFNKHKLVHSDTR 503
            .:||.|.||:|  |.|...|...:.:|.|..||:.| .:.|.:||....||....||:..|:..:
Mouse  1639 KLHTGEKPFKCTWPTCHYSFLTASAMKDHYRTHTGEKSFLCDLCGFAGGTRHALTKHRRQHTGEK 1703

  Fly   504 QFKCEVCGSAFKRSKTLKAHLILHTGIRPYKCNFCGRDFANGSNC-------------------- 548
            .|||:.|..|......|..|..:|||.:||:|.:|  |:.  |||                    
Mouse  1704 PFKCDECNFASTTQSHLTRHKRVHTGEKPYRCPWC--DYR--SNCAENIRKHILHTGKHEGVKMY 1764

  Fly   549 ---------------RSHKRQAHP----KELAEEEARGVTRS----------TLLPMLDELTIAS 584
                           |:|.::.||    .:||...|..|::|          |.:......|.|:
Mouse  1765 NCPKCDYGTNVPVEFRNHLKEQHPDIENPDLAYLHAGIVSKSYECRLKGQGATFVETDSPFTAAT 1829

  Fly   585 KLLKTPAGPCKVKGSRPKAAPKDQ 608
            ...::|.....::.|:.:||..:|
Mouse  1830 LAEESPVKERSLRSSKRQAASPEQ 1853

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6254NP_649983.2 zf-AD 21..99 CDD:285071 14/47 (30%)
COG5048 <353..554 CDD:227381 74/280 (26%)
C2H2 Zn finger 364..384 CDD:275368 9/25 (36%)
C2H2 Zn finger 395..416 CDD:275368 6/20 (30%)
C2H2 Zn finger 424..444 CDD:275368 7/19 (37%)
C2H2 Zn finger 452..472 CDD:275368 6/21 (29%)
C2H2 Zn finger 479..499 CDD:275368 7/19 (37%)
C2H2 Zn finger 507..527 CDD:275368 5/19 (26%)
zf-H2C2_2 520..544 CDD:290200 10/23 (43%)
C2H2 Zn finger 535..553 CDD:275368 8/52 (15%)
Zfp407NP_001028513.2 C2H2 Zn finger 180..200 CDD:275368
C2H2 Zn finger 209..230 CDD:275368
C2H2 Zn finger 524..552 CDD:275371
C2H2 Zn finger 553..575 CDD:275371
C2H2 Zn finger 1407..1436 CDD:275371 6/35 (17%)
C2H2 Zn finger 1437..1459 CDD:275371 2/21 (10%)
C2H2 Zn finger 1479..1500 CDD:275371 4/20 (20%)
C2H2 Zn finger 1530..1552 CDD:275368 8/22 (36%)
zf-H2C2_2 1548..1569 CDD:290200 8/20 (40%)
C2H2 Zn finger 1560..1580 CDD:275368 1/19 (5%)
C2H2 Zn finger 1588..1608 CDD:275368 5/19 (26%)
COG5048 <1618..1737 CDD:227381 42/118 (36%)
C2H2 Zn finger 1621..1641 CDD:275368 7/19 (37%)
zf-H2C2_2 1633..1660 CDD:290200 11/26 (42%)
C2H2 Zn finger 1649..1671 CDD:275368 6/21 (29%)
C2H2 Zn finger 1679..1699 CDD:275368 7/19 (37%)
zf-H2C2_2 1691..1716 CDD:290200 8/24 (33%)
COG5048 1703..>1758 CDD:227381 18/58 (31%)
C2H2 Zn finger 1707..1727 CDD:275368 5/19 (26%)
zf-H2C2_2 1719..1744 CDD:290200 11/28 (39%)
C2H2 Zn finger 1735..1752 CDD:275368 6/20 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24403
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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