DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6254 and Zfp407

DIOPT Version :10

Sequence 1:NP_649983.2 Gene:CG6254 / 41244 FlyBaseID:FBgn0037794 Length:634 Species:Drosophila melanogaster
Sequence 2:NP_001028513.2 Gene:Zfp407 / 240476 MGIID:2685179 Length:2246 Species:Mus musculus


Alignment Length:739 Identity:178/739 - (24%)
Similarity:276/739 - (37%) Gaps:214/739 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 VDIKREDELSNFLCSE----CFTLMDCLIEFSERVRKVQILF----SKLQL---LQSNNL----M 108
            |.:..|.| |||  ||    |.||...|:: .:.::..:|:.    |.|.|   |||.||    :
Mouse  1140 VTVVTEQE-SNF--SEGHSFCETLQQPLVK-DKSMKPREIVSPNTPSNLSLPGCLQSENLASSAV 1200

  Fly   109 DYEKIREDCGVATDGWKHIMLGAV-DESLPQNDE---VFISEEQPI---VCQTE-----TSSKMK 161
            |.|..:::..|         |.|| |.|.|..||   |..|||:.:   .|..:     ::....
Mouse  1201 DCETAKKNRDV---------LDAVGDRSTPCEDEGGSVDDSEEKILDKSPCPGDPDGGHSAESTS 1256

  Fly   162 SEILMIPNFLVEKQ--------CLQEKQDFP--KEEDVIE-EEMQISGVEEE--ILEEDVEEDLA 213
            |.::.||...::..        |.|..:|..  :...::| :|:.|:..||.  |||||......
Mouse  1257 SVVMKIPREQLDLDGGGQNKVGCEQTSEDLKDVQANPILENKEILINSQEEAEVILEEDAPTSNG 1321

  Fly   214 EEEVETVEE---EIDTVG------------------EEVEAVEEELETQDATDCLVEEV-----E 252
            ..:...|.|   .||..|                  |:.|.||:..|...||...|.|:     .
Mouse  1322 TADSNDVYETIISIDDKGQTMYSFGRFDSSIIRIKTEDGELVEQPEEGLTATGGRVSELPLKDCA 1386

  Fly   253 HMTEDRYIEESQIIEESQV------------SDFNMETYEIVQHNPQKEPVETKD-----TVESI 300
            ...:.:.:|.....|.:::            |..|:       |...|.|.:.|.     ..:|.
Mouse  1387 QGLKKKKVEGGSFGESTRIRCDDCGFLADGLSGLNV-------HIAMKHPTKEKHFHCLLCGKSF 1444

  Fly   301 ESNEDTQEDI-SREHVTDEEDEISEVP---AMYKCNICKKPYKKPKAYKRH--------MEEVHN 353
            .:..:..:.: |..|:.:|:..:.|:|   |.:||..|.:|:...:....|        :.||:.
Mouse  1445 YTESNLHQHLASAGHMRNEQASVEELPEGGATFKCVKCTEPFDSEQNLFLHIKGQHEELLREVNK 1509

  Fly   354 TVADDLPQL-------ECNQCKLC------FPTVAQLHAHHRTHVRAKP-KTDNC---------- 394
            .:.:|..|:       :.|.||.|      ..::|.| ||.|||..:|| |...|          
Mouse  1510 YIVEDTEQINREREENQGNVCKYCGKMCRSSNSMAFL-AHIRTHTGSKPFKCKICHFATAQLGDA 1573

  Fly   395 --------------CPHCEKRFTTSGTLKRHIEGIHNQIKP----YVCDLCGKSFNYITGLKDHK 441
                          |..|...|.....|..|:.|.|....|    :.|.||.:||.....|.:|.
Mouse  1574 RNHVKRHLGMREYKCHVCGVAFVMKKHLNTHLLGKHGVGTPKERKFTCHLCDRSFTEKWALNNHM 1638

  Fly   442 LVHTDECPFEC--PVCKRGFKNNARLKIHLDTHSAE-IYECTVCGLKLKTRRTFNKHKLVHSDTR 503
            .:||.|.||:|  |.|...|...:.:|.|..||:.| .:.|.:||....||....||:..|:..:
Mouse  1639 KLHTGEKPFKCTWPTCHYSFLTASAMKDHYRTHTGEKSFLCDLCGFAGGTRHALTKHRRQHTGEK 1703

  Fly   504 QFKCEVCGSAFKRSKTLKAHLILHTGIRPYKCNFCGRDFANGSNC-------------------- 548
            .|||:.|..|......|..|..:|||.:||:|.:|  |:.  |||                    
Mouse  1704 PFKCDECNFASTTQSHLTRHKRVHTGEKPYRCPWC--DYR--SNCAENIRKHILHTGKHEGVKMY 1764

  Fly   549 ---------------RSHKRQAHP----KELAEEEARGVTRS----------TLLPMLDELTIAS 584
                           |:|.::.||    .:||...|..|::|          |.:......|.|:
Mouse  1765 NCPKCDYGTNVPVEFRNHLKEQHPDIENPDLAYLHAGIVSKSYECRLKGQGATFVETDSPFTAAT 1829

  Fly   585 KLLKTPAGPCKVKGSRPKAAPKDQ 608
            ...::|.....::.|:.:||..:|
Mouse  1830 LAEESPVKERSLRSSKRQAASPEQ 1853

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6254NP_649983.2 zf-AD 21..99 CDD:462262 14/47 (30%)
COG5048 <353..554 CDD:227381 74/280 (26%)
C2H2 Zn finger 364..384 CDD:275368 9/25 (36%)
C2H2 Zn finger 395..416 CDD:275368 6/20 (30%)
C2H2 Zn finger 424..444 CDD:275368 7/19 (37%)
C2H2 Zn finger 452..472 CDD:275368 6/21 (29%)
C2H2 Zn finger 479..499 CDD:275368 7/19 (37%)
C2H2 Zn finger 507..527 CDD:275368 5/19 (26%)
C2H2 Zn finger 535..553 CDD:275368 8/52 (15%)
Zfp407NP_001028513.2 C2H2 Zn finger 180..200 CDD:275368
C2H2 Zn finger 209..230 CDD:275368
C2H2 Zn finger 524..552 CDD:275371
C2H2 Zn finger 553..575 CDD:275371
C2H2 Zn finger 1407..1436 CDD:275371 6/35 (17%)
C2H2 Zn finger 1437..1459 CDD:275371 2/21 (10%)
C2H2 Zn finger 1479..1500 CDD:275371 4/20 (20%)
C2H2 Zn finger 1530..1552 CDD:275368 8/22 (36%)
zf-H2C2_2 1548..1569 CDD:463886 8/20 (40%)
C2H2 Zn finger 1560..1580 CDD:275368 1/19 (5%)
C2H2 Zn finger 1588..1608 CDD:275368 5/19 (26%)
zf-C2H2 1619..1641 CDD:395048 7/21 (33%)
C2H2 Zn finger 1621..1641 CDD:275368 7/19 (37%)
zf-H2C2_2 1633..1660 CDD:463886 11/26 (42%)
C2H2 Zn finger 1649..1671 CDD:275368 6/21 (29%)
C2H2 Zn finger 1679..1699 CDD:275368 7/19 (37%)
zf-H2C2_2 1691..1716 CDD:463886 8/24 (33%)
zf-H2C2_5 1705..1729 CDD:404746 8/23 (35%)
C2H2 Zn finger 1707..1727 CDD:275368 5/19 (26%)
zf-H2C2_2 1719..1744 CDD:463886 11/28 (39%)
C2H2 Zn finger 1735..1752 CDD:275368 6/20 (30%)
Blue background indicates that the domain is not in the aligned region.

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