DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6254 and znf-782

DIOPT Version :9

Sequence 1:NP_649983.2 Gene:CG6254 / 41244 FlyBaseID:FBgn0037794 Length:634 Species:Drosophila melanogaster
Sequence 2:NP_500033.1 Gene:znf-782 / 190310 WormBaseID:WBGene00021931 Length:662 Species:Caenorhabditis elegans


Alignment Length:549 Identity:124/549 - (22%)
Similarity:195/549 - (35%) Gaps:161/549 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   190 IEEEMQISGVEEEILEEDVEEDLAEEEVETVEEEIDTVGEEVEAVEEELETQDATDCLVE----- 249
            :.:::.:...|||..|| .|::|.||     |||.|   ||:    ||||..|:...||.     
 Worm    15 LPDDIHMKDPEEEEFEE-YEDELLEE-----EEEFD---EEL----EELENSDSASSLVSAGSPH 66

  Fly   250 ---------------EVEH-------------MTEDRYI--------EESQIIEESQVSDFNMET 278
                           :|:.             ..|.|:|        ....|:|..:.|....:.
 Worm    67 GSSSSNGSHGSSPPLQVQSPSQGSGSSGSPTGQPEKRHICTVCGKGFSYFSILESHKRSHTGEKP 131

  Fly   279 YEIVQHNPQKEPVETKDTVESIESNEDTQEDISREHVTDEEDEISEVPAMYKCNICKKPYKKPKA 343
            |..  |..||...: |.|::..|          |.|.       .|.|  |||..|:|.:.:...
 Worm   132 YNC--HFCQKTFAQ-KATLQVHE----------RTHT-------GERP--YKCRYCEKTFAQYGT 174

  Fly   344 YKRHMEEVHNTVADDLPQLECNQCKLCFPTVAQLHAHHRTHVRAKPKTDNC-------------- 394
            ...|.:..|..:.:    .:|.:|.....:.:.|:.|.:||.....:.|.|              
 Worm   175 KTVHEKSAHLGIRN----YKCPKCDKLLSSPSALYTHKKTHGDKTFRCDFCPKTFALKNYLKLHV 235

  Fly   395 ------------CPHCEKRFTTSGTLKRHIEGIHNQIKPYVCDLCGKSFNYITGLKDHKLVHTDE 447
                        |.:|.|.|..:|:|:.|:. .|...:||||..|.|:|.....|:.|:..||.|
 Worm   236 KQVHEQNERKHVCVYCNKGFAYAGSLQVHVR-THTGERPYVCKFCPKAFASQGNLQSHERTHTGE 299

  Fly   448 CPFECPVCKRGFKNNARLKIHLDTH------------SAEI---------------YECTVCGLK 485
            .|:.|..|:|.|...::|..|..||            :|:|               ||||.|..|
 Worm   300 RPYSCQFCQRTFIQKSQLTAHESTHLTQKHSVNPDSTTADILPVAGSVTDHQMVGNYECTFCNKK 364

  Fly   486 LKTRRTFNKHKLVHSDTRQFKCEVCGSAFKRSKTLKAH----------LILHTGIRPYKCNFCGR 540
            .....:...|...|::...:.|:.||..:.:..:|..|          |........:.|:.||:
 Worm   365 YPYASSLYIHMRKHTEKSAYSCDGCGKPYSQKISLNIHQDQCEAFKNRLKTTDSQFSHNCDGCGK 429

  Fly   541 DFA-------NGSNCRSHKRQAHPKELAEE-------EARGVTRSTLLPMLD-ELTIASKLLKTP 590
            .|.       :..:|..||..|..| |:::       ::...|...:.|:.: .||:|....:.|
 Worm   430 SFVQRIALQIHVDSCEPHKNLARLK-LSQQQNQNQNSDSESDTEMKICPLPNPPLTLAPTHQQIP 493

  Fly   591 AGPCKVKGSRPKAAPKDQDNGNESPTKDT 619
            . |..:...:|...|.....||.|.|..|
 Worm   494 P-PVNIYAQQPPPNPLGSILGNTSLTPQT 521

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6254NP_649983.2 zf-AD 21..99 CDD:285071
COG5048 <353..554 CDD:227381 60/270 (22%)
C2H2 Zn finger 364..384 CDD:275368 4/19 (21%)
C2H2 Zn finger 395..416 CDD:275368 7/20 (35%)
C2H2 Zn finger 424..444 CDD:275368 6/19 (32%)
C2H2 Zn finger 452..472 CDD:275368 6/19 (32%)
C2H2 Zn finger 479..499 CDD:275368 5/19 (26%)
C2H2 Zn finger 507..527 CDD:275368 6/29 (21%)
zf-H2C2_2 520..544 CDD:290200 7/40 (18%)
C2H2 Zn finger 535..553 CDD:275368 6/24 (25%)
znf-782NP_500033.1 C2H2 Zn finger 106..126 CDD:275368 2/19 (11%)
zf-H2C2_2 119..143 CDD:290200 6/25 (24%)
C2H2 Zn finger 134..154 CDD:275368 7/32 (22%)
zf-H2C2_2 147..171 CDD:290200 10/42 (24%)
C2H2 Zn finger 162..180 CDD:275368 4/17 (24%)
COG5048 <187..404 CDD:227381 52/221 (24%)
C2H2 Zn finger 191..211 CDD:275370 4/19 (21%)
C2H2 Zn finger 218..239 CDD:275368 2/20 (10%)
C2H2 Zn finger 248..268 CDD:275368 7/20 (35%)
zf-H2C2_2 260..285 CDD:290200 10/25 (40%)
C2H2 Zn finger 276..296 CDD:275368 6/19 (32%)
zf-H2C2_2 288..313 CDD:290200 10/24 (42%)
C2H2 Zn finger 304..324 CDD:275368 6/19 (32%)
C2H2 Zn finger 386..403 CDD:275368 4/16 (25%)
C2H2 Zn finger 424..441 CDD:275368 4/16 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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