DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6254 and sdz-12

DIOPT Version :9

Sequence 1:NP_649983.2 Gene:CG6254 / 41244 FlyBaseID:FBgn0037794 Length:634 Species:Drosophila melanogaster
Sequence 2:NP_494634.1 Gene:sdz-12 / 184388 WormBaseID:WBGene00017406 Length:330 Species:Caenorhabditis elegans


Alignment Length:324 Identity:67/324 - (20%)
Similarity:112/324 - (34%) Gaps:93/324 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   299 SIESNEDTQEDISREHVTDEEDEISEVPAMYKCNICKKPYKKPKAYKRHMEEV-----HNTVADD 358
            |:.|.:.....|:.....|::.  ::||   :|.:||:.:...|..:.||:.:     .:.|.:.
 Worm     2 SLSSLDAVLSLIATSSTLDQDS--AKVP---QCQVCKRKFANQKTLRTHMKHITCRPGRSNVVNH 61

  Fly   359 LPQLECNQCKLCFPTVAQLHAHHRTHVRAKPKTDNCCPHCEKRFTTSGTLKRHIEGIHNQIKP-- 421
              :..|..|:..|.....|..|..||..:|.|.   |..|::.|.....|:||   :||.:|.  
 Worm    62 --KFRCENCEKQFTNKPNLKRHQITHSGSKSKK---CSTCQRTFFREDQLQRH---LHNHLKERS 118

  Fly   422 -YVCDL--CGKSFNYITGLKDHKLVH-----TDECPFECPVCKRGFKNNARLKIH---------- 468
             :.|.:  |...|.:..|:::|.:.|     ::..|  |..|.:.|.:...|.:|          
 Worm   119 HFDCPVLNCSMQFVFYEGVENHLVNHHHFSYSESAP--CGKCHKLFGSPRHLLVHYHFDHKEALR 181

  Fly   469 ----LDTHSAEIYECTV---------------------CGLKLKTRRTF------NKHKLVHSD- 501
                ..|.||.:...||                     ..:.|.|....      |...|.::| 
 Worm   182 SSAPAPTSSARLSPITVSTSGSPRAQLAISPQEKPPQKLSINLGTSPMIEEFCEQNSATLPNTDQ 246

  Fly   502 ---------------------TRQFKCEVCGSAFKRSKTLKAHLILHTGIRPYKCNFCGRDFAN 544
                                 |..|:|:.|...|..:.....|..||....|:||..||.:..|
 Worm   247 QLSPTLSPNEPRFRNLITSEPTPSFECKHCTIKFHDATMSIMHNALHAPGSPFKCAICGAECGN 310

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6254NP_649983.2 zf-AD 21..99 CDD:285071
COG5048 <353..554 CDD:227381 55/265 (21%)
C2H2 Zn finger 364..384 CDD:275368 5/19 (26%)
C2H2 Zn finger 395..416 CDD:275368 6/20 (30%)
C2H2 Zn finger 424..444 CDD:275368 5/21 (24%)
C2H2 Zn finger 452..472 CDD:275368 5/33 (15%)
C2H2 Zn finger 479..499 CDD:275368 6/46 (13%)
C2H2 Zn finger 507..527 CDD:275368 4/19 (21%)
zf-H2C2_2 520..544 CDD:290200 8/23 (35%)
C2H2 Zn finger 535..553 CDD:275368 4/10 (40%)
sdz-12NP_494634.1 SFP1 <25..86 CDD:227516 15/65 (23%)
C2H2 Zn finger 29..48 CDD:275368 6/18 (33%)
COG5236 <32..>197 CDD:227561 39/174 (22%)
C2H2 Zn finger 65..85 CDD:275368 5/19 (26%)
C2H2 Zn finger 93..113 CDD:275368 7/22 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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