DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6254 and znf827

DIOPT Version :10

Sequence 1:NP_649983.2 Gene:CG6254 / 41244 FlyBaseID:FBgn0037794 Length:634 Species:Drosophila melanogaster
Sequence 2:XP_002938981.2 Gene:znf827 / 100485396 XenbaseID:XB-GENE-1033048 Length:1318 Species:Xenopus tropicalis


Alignment Length:299 Identity:55/299 - (18%)
Similarity:99/299 - (33%) Gaps:87/299 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 KQEKMPQRKRT------MDSPQEEDVEVKKKATEVEYVVRSLA-SDE----PAPFSDEALAITTR 58
            |:.|..:||:.      ...|..||.::.:|..|.|.:::|:. |.|    |.|.|..:.:::|.
 Frog    25 KKRKEEERKKKEAEQQHKAEPIAEDSDLDRKRRETEALLQSIGISPEPPLVPTPMSPSSKSLSTP 89

  Fly    59 EAVDYSKKITLAMAEANEAGRPVRIYAD-GIYDLFHHGHANQLRQVKKMFPNVYLIVGVCGDRDT 122
            ........:     |....||.::...| .:..|  |..:...|::.|:                
 Frog    90 SEAGSQDSV-----EGTLMGRTLQWDTDPSVLQL--HSDSELGRRLIKL---------------- 131

  Fly   123 HKYKGRTVTSEEERYDGVRHCRYVDEVYREAPWFCTVEFLKNLKVDFIAHDAIPYVAPGEEDLYE 187
                            ||.....||.:.||     .|.:.|..:.....|.    ....|||   
 Frog   132 ----------------GVSKVTQVDFLPRE-----VVSYSKETQTPVTTHQ----TEEEEED--- 168

  Fly   188 KFRREGMFLETERTEGVSTSDVVCRIIRDYDKYVRRNLQRGYSPKELNVGFLAASKYQIQNKVDS 252
               .|.:.|:||...             :::....:...|...|:||.    ...|.|:.:..:.
 Frog   169 ---EEMVDLKTEHDS-------------EFENQEEKQDSREVPPRELT----EEEKQQVTHSEEF 213

  Fly   253 L--KSKGIELLSTWKSKSDDIIRDFI--DTFHKDGGLNA 287
            |  ..:.|.::....::..:|..|:.  |...|:|.:.|
 Frog   214 LIFFDRTIRVIERALAEDSNIFFDYSGRDLEDKEGDIQA 252

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6254NP_649983.2 zf-AD 21..99 CDD:462262 18/83 (22%)
COG5048 <353..554 CDD:227381
C2H2 Zn finger 364..384 CDD:275368
C2H2 Zn finger 395..416 CDD:275368
C2H2 Zn finger 424..444 CDD:275368
C2H2 Zn finger 452..472 CDD:275368
C2H2 Zn finger 479..499 CDD:275368
C2H2 Zn finger 507..527 CDD:275368
C2H2 Zn finger 535..553 CDD:275368
znf827XP_002938981.2 COG5048 360..829 CDD:227381
C2H2 Zn finger 364..384 CDD:275368
C2H2 Zn finger 392..412 CDD:275368
C2H2 Zn finger 423..443 CDD:275368
C2H2 Zn finger 792..812 CDD:275370
C2H2 Zn finger 820..840 CDD:275370
C2H2 Zn finger 994..1014 CDD:275368
C2H2 Zn finger 1022..1042 CDD:275368
C2H2 Zn finger 1051..1071 CDD:275368
C2H2 Zn finger 1078..1098 CDD:275368
zf-H2C2_5 1104..1128 CDD:404746
C2H2 Zn finger 1106..1126 CDD:275368
zf-H2C2_2 1119..1143 CDD:463886
C2H2 Zn finger 1134..1153 CDD:275368
C2H2 Zn finger 1163..1183 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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