DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment TAF1B and Aga

DIOPT Version :9

Sequence 1:NP_001262451.1 Gene:TAF1B / 41242 FlyBaseID:FBgn0037792 Length:872 Species:Drosophila melanogaster
Sequence 2:XP_006253173.1 Gene:Aga / 290923 RGDID:1309646 Length:364 Species:Rattus norvegicus


Alignment Length:232 Identity:43/232 - (18%)
Similarity:66/232 - (28%) Gaps:101/232 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly    80 ITSWEFYNYV-------LRGFLQELLNMGAKPELKLMTLQVWAAYLDSME--------------V 123
            :.:|.|.|..       |||   ::.....|......||....:.||::|              |
  Rat    31 VNTWPFKNATEAVSVISLRG---DIFATQRKTVTAWWTLVSGGSALDAVEKGCAMCEKEQCGGTV 92

  Fly   124 AFSKS----NKTGLPKLNVRALPID----------------ARIIYNHKTFKKGKKGKKSTLTGD 168
            .|..|    .:|.|..:.:....:|                ||.:..|.|        .:.|.| 
  Rat    93 GFGGSPDEVGETTLDAMIMDGTAMDVGAVGGLRRIKNAIGVARKVLEHTT--------HTLLVG- 148

  Fly   169 PNDERAKFRLWNRTKRNLDASGYRSHGGASE---SEGEQSLHLQWSMR----------------- 213
              |...||.:              |.|..||   :...::||..|..|                 
  Rat   149 --DSATKFAV--------------SMGFTSEDLSTNTSRALHSDWLSRNCQPNYWRNVIPDPSKY 197

  Fly   214 ---------ARKSLKRHMPLKHLDKHSRDSKGSMSCH 241
                     ..::.:.|   |.:|.||.|:.|.:..|
  Rat   198 CGPYKPPDFLEQNNRAH---KEVDIHSHDTIGMVVIH 231

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TAF1BNP_001262451.1 RRN7 8..40 CDD:288614
AgaXP_006253173.1 Glycosylasparaginase 29..350 CDD:271335 43/232 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1446
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.