DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment TAF1B and rrn7

DIOPT Version :9

Sequence 1:NP_001262451.1 Gene:TAF1B / 41242 FlyBaseID:FBgn0037792 Length:872 Species:Drosophila melanogaster
Sequence 2:NP_596129.1 Gene:rrn7 / 2540236 PomBaseID:SPBC336.09c Length:537 Species:Schizosaccharomyces pombe


Alignment Length:676 Identity:141/676 - (20%)
Similarity:225/676 - (33%) Gaps:234/676 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 LETMQLENMHCDV--CEGTTFQEREGFYYCVECGTQKDQIRAVDITAEDNFDDTAAGRY----TA 63
            :|....|...|.|  |:.|.:.:..|..:|.....|    ..::| |:|  |:..||.:    ..
pombe     1 MEGNWFEGPPCSVRNCKSTWYFKNAGQTFCRRGHAQ----HGIEI-AQD--DEPGAGTFYQTRKR 58

  Fly    64 RTIRQKKDTEKEDEDDIT--------SWEFYNYVLRGFLQEL-LNMGAKPELKLMTLQVWAAYLD 119
            :.:|...||  .|||:|.        ..:.:..:|:...|.| ..:|....::.|...:||.||.
pombe    59 KVVRNHLDT--GDEDEIVYGTAGRSLYLQAFQIILQLQCQALTTKLGFDQRIEGMIRDLWALYLS 121

  Fly   120 SMEVAFSKSNKTGLPKLNVRALPIDARIIYNHKTFKKGKKGKKSTLTGDPNDERAKFRLWNRTKR 184
            ....:|:.|    ...||                        :::...:.:|.            
pombe   122 LSYESFTSS----FLSLN------------------------QNSTQSESSDS------------ 146

  Fly   185 NLDASGYRSHGGASESEGEQSLHLQWSMRARKSLKRHMPLKHLDKHSRDSKGSMSCHSLR-PRVK 248
            :.|.....|..||                              |..||.:|.:...||:. ||:.
pombe   147 DFDLIDPESQPGA------------------------------DPSSRKTKETSQSHSISYPRLL 181

  Fly   249 QLHNFDRNIY--C------LNIIKLYVVLGIALNMVE-----DDIQLSDLLRFIDEEHLTKRCML 300
            ....|   ||  |      |.|.||.|:  |..|::.     ..|.|.          :.||...
pombe   182 YSSAF---IYVACLLLRLPLTIHKLEVL--IRKNIIPYYRAYKQIPLK----------IFKRLQK 231

  Fly   301 NYL--------PGNVAAKGKAL-LKDMELSKMKDKVTNKLLRVNIACMSRFINLSEYQKPN---- 352
            ||:        |.....:...| |.|:.:||.:.||                     ..||    
pombe   232 NYVRMLIPFHYPTYQRIQSAVLTLVDVLVSKYELKV---------------------PPPNEPLI 275

  Fly   353 LHSLAERYI--LELALP-PRLLKYVNSLLDLHPPTFFN-------AMTVH-PYPRYEARTMAYIL 406
            |..|...:.  ||:.:| .|||..|:|.:.|...:..|       |.::| .....|...:|.||
pombe   276 LFELINSFFFPLEIFIPASRLLNLVHSQISLQGTSSDNYQSKIRSAQSIHEKLSDAEVMLLATIL 340

  Fly   407 YAMKLLFGLDDLKERNISESAAKINEKLLEVGGDEAPLLFVFTEW-MEFVEMRKVIVSHYNQSFA 470
            .|..:.:|.||.:.||     :|..:.:..|.          |.| |...:::|:     |:...
pombe   341 VAANVCYGFDDAQTRN-----SKYKDSMFTVK----------TNWNMWLSQVQKI-----NEKEK 385

  Fly   471 RRF------GVSTRTGCQVDDILAKEWKEKEQGETFGWMQGSAAMKRQHENLTHIIETMLKDHFG 529
            .:|      .:.|....::|...  :|.|||..|               ||..:.|...:.:.|.
pombe   386 DKFYEIDEQSILTLNNSEMDKYF--QWYEKEFVE---------------ENNPNNIPEGILNVFP 433

  Fly   530 ESSKESMEKEHIEFQPS--LTPAHSYFNRILL-QVSRSDGAKMKITIPDHMKVDHSAR-----NL 586
            ..||:|..:|:   ||:  ||........:.| ||.:..|.|      :..|:|.|.|     ::
pombe   434 ILSKDSHLQEN---QPTDILTDESVIAEDVKLEQVFKPVGIK------ESDKMDFSRRKDAYISM 489

  Fly   587 DPFVLETTELSQYLSQHGLKLRVEEL 612
            .||...|..     :.|.:.:.|.:|
pombe   490 LPFSPNTEN-----TAHRVTIMVAKL 510

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TAF1BNP_001262451.1 RRN7 8..40 CDD:288614 8/33 (24%)
rrn7NP_596129.1 RRN7 10..37 CDD:288614 7/30 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR31576
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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