DRSC/TRiP Functional Genomics Resources

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Protein Alignment TAF1B and taf1b

DIOPT Version :9

Sequence 1:NP_001262451.1 Gene:TAF1B / 41242 FlyBaseID:FBgn0037792 Length:872 Species:Drosophila melanogaster
Sequence 2:XP_002938934.1 Gene:taf1b / 100379921 XenbaseID:XB-GENE-992275 Length:596 Species:Xenopus tropicalis


Alignment Length:746 Identity:169/746 - (22%)
Similarity:264/746 - (35%) Gaps:231/746 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MEEVLETMQLENMHCDVCEGTTFQ-EREGFYYCVECGTQKDQIRAVDITAEDNFDDTAAGRYTAR 64
            |||  |..:..|..|..|....:. ..||.:||..|.|..::.|.||.|  :.|......:..:|
 Frog     1 MEE--EDARGYNKPCPQCSEVNWAISDEGTFYCKSCHTVIEKTREVDDT--EVFSTHGKLQSISR 61

  Fly    65 TIRQKKDTEKEDEDDITSWEFYNYVLRGF-------LQELLNMGAKPELK---LMTLQVWAAYLD 119
            .:|:|:..||       .||:  ||..||       .:.|..:|..|::|   |.|.  |..||.
 Frog    62 GLRKKRKLEK-------GWEW--YVCEGFQFILIKQAEALQALGVAPQIKDEILCTF--WRRYLQ 115

  Fly   120 SMEVAFSKSNKTGLPKLNVRALPIDARIIYNHKTFKKGKKGKKSTLTGDPNDERAKFRLWNRTKR 184
            ....|:.|                  |.:|            :|.||...:|..|       |:.
 Frog   116 KTNQAYVK------------------RPVY------------RSVLTCRDSDSSA-------TEV 143

  Fly   185 NLDASGYRSHGGASESEGEQSLHLQWSMRARKSLKRHMPLKHLDKHSRDSKGSMSCHSLR----P 245
            :.|...: |.|.:|.|:|..|     ....|.||    |.:.:..   .|:.::|.||..    .
 Frog   144 DSDLEAF-SIGTSSVSDGYTS-----DASGRLSL----PTEDIPS---ASESAVSVHSGSVDGLS 195

  Fly   246 RVKQLHNFDRNIYCLNIIKLYVVLG-----IALNMVEDDIQLSDLLRFIDEEHLTKRCMLNYLPG 305
            .||...||..    .|.:|:.:.:.     :||..:...|.|||||||:.|:|:.......|||.
 Frog   196 HVKMRKNFKP----WNYVKMTMPMTLAFCYLALLWLRASITLSDLLRFVFEKHIPYINAHQYLPE 256

  Fly   306 NVAAKGKALLKDMELSKMKD-KVTNKLLRVNIACMSRFINLSE--------YQKPNLHSLAERYI 361
            .:...|    .|:.:.:|:. .|.|.:|..... :..|::|.:        |..|::  |..:|:
 Frog   257 EIKVYG----HDVRIFRMQALPVYNDILSKAYE-LGAFLDLPQFPPITKNCYLHPSV--LCMKYL 314

  Fly   362 LELALPPRLLKYV------NSLLDLHPPTFFNAMTVHPYPRYEARTMAYILYAMKLLFGLDDLKE 420
            :|..||..|.::.      ..:.|.|..||..|.....:.||:.:.:|.|:..:||||.|||..|
 Frog   315 IEANLPDELQQWTCQVAEKTGIDDFHRLTFDPACKRASHIRYDVQAVALIILVLKLLFALDDNTE 379

  Fly   421 RNISESAAKIN--------------------------EKLLEVGG-----DEAPLLFVFTEWMEF 454
            ..:|:.|.::|                          :||.|..|     .:.||.:..|. ...
 Frog   380 WQLSKFAERMNQSNKEKTVFDLQSWYQTVRQCYEKAQQKLEEEYGRFMWKSDCPLYYSQTT-KSL 443

  Fly   455 VEMRKVIVSHYNQSFARRFGVSTRTGCQVDDILAKEWKEKEQGETFGWMQGSAAMKRQHENLTHI 519
            ::.||.:..:..:.|::..|.:..||.|.......:| |::..:|..:          |   .|.
 Frog   444 LQKRKQMSENLQRQFSKLAGAAPNTGKQGPSSFLFKW-EEQNTDTISF----------H---GHS 494

  Fly   520 IETMLKDHFGESSKESMEKEHIEFQPSLTPAHSYFNRILLQVSRSDGAKMKITIPDHMKVDHSAR 584
            ::.:|  |.|:.            .|:....|.:.|.:         .|.|..|..|.       
 Frog   495 LQAVL--HQGKK------------PPTPINTHYWLNSL---------RKCKTRICQHS------- 529

  Fly   585 NLDPFVLETTELSQY-LSQH------GLKLRVEELACQEDIQNVGIFRPLTIIRGDGREYRANTE 642
                   |..|.|.: .|.|      ...||||......:   ||:..                 
 Frog   530 -------ELYEESNFPRSYHFMVCLFAFLLRVEHCVIHHE---VGLIE----------------- 567

  Fly   643 IKTETWISELKRKEKR-------PDFRFTQP 666
               |.:..|.|.|.|:       .|||...|
 Frog   568 ---ELFFQEKKNKRKQKPKKQEMTDFREVPP 595

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TAF1BNP_001262451.1 RRN7 8..40 CDD:288614 9/32 (28%)
taf1bXP_002938934.1 zf-RRN7 7..39 CDD:371721 9/31 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 72 1.000 Inparanoid score I5128
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D167353at33208
OrthoFinder 1 1.000 - - FOG0008322
OrthoInspector 1 1.000 - - oto105603
Panther 1 1.100 - - LDO PTHR31576
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R6327
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
88.100

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