Protein Alignment gammaSnap2 and GSNAP

DIOPT Version :10

• Sequence 1: NP_649980.1
• Gene: gammaSnap2 / 41239
• FlyBaseID: FBgn0266721
• Length: 283
• Species: Drosophila melanogaster
• Sequence 2: NP_001328932.1
• Gene: GSNAP / 827789
• AraportID: AT4G20410
• Length: 297
• Species: Arabidopsis thaliana
• Alignment Length: 249
• Identity: 62/249 - (24%)
• Similarity: 111/249 - (44%)
• Gaps: 25/249 - (10%)

  Fly    31 MYFKAATAYRIAKSFDKRKDCLLKAIDCYENNKSWFHAAKSYEQIILLAKETDKLSEVEDYANRA 95
            :|.:||..:|.:..::|.|..|.||....|...|.:.|||..|....||::....:||.|:..:|
plant    39 LYEQAANGFRASNKYEKAKVALEKASKGQEMQASPWDAAKHMESAAALAQKLSIWNEVADFYRKA 103

  Fly    96 CCLYQQHGSPEAAAAALDKAAKMTESKHPDLALGFYKRALAVVLIGDSTHQASEFASKVSRILVR 160
            ..||.:.|..:.|:.||.|||:..|...||.|:..|..|..::........|.:.....:.:.::
plant   104 SELYVECGRAQPASDALGKAARALEDVKPDDAIQLYTDACEILEEDGRDQMAFDLYRACANVYIK 168

  Fly   161 LKKYEEATK-------ALKKEISLNLQTKSYGQVGRLVVALILVQLTLEDYVDAKKTFKKWGNRC 218
            |:|:.:|..       |..|..:.|.|.|:|       ::.|::.|...|...|:|.:    |.|
plant   169 LEKFTDAATFFLRLGVAADKCDATNSQCKAY-------LSAIILYLYAHDLQQAEKCY----NDC 222

  Fly   219 D-------PQEVNTLQNLLKAFDDEDPELATKMLASPFIRHMDVEYALLSKDVP 265
            .       ..:..:...||.|:::.|.|...|:.::..:.::|.....|::.:|
plant   223 SQIDAFLKSDQSRSASRLLTAYNEGDIEEIKKVASASTVSNLDHMIIKLARKLP 276

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
gammaSnap2	NP_649980.1	SNAP	29..239	CDD:451671	57/221 (26%)
		TPR repeat	29..61	CDD:276937	9/29 (31%)
		TPR repeat	65..102	CDD:276937	12/36 (33%)
		TPR repeat	105..140	CDD:276937	12/34 (35%)
		TPR repeat	144..180	CDD:276937	7/42 (17%)
GSNAP	NP_001328932.1	SNAP	24..279	CDD:451671	62/249 (25%)
		TPR repeat	32..69	CDD:276937	9/29 (31%)
		TPR repeat	73..110	CDD:276937	12/36 (33%)
		TPR repeat	113..148	CDD:276937	12/34 (35%)
		TPR repeat	149..186	CDD:276809	4/36 (11%)
		TPR repeat	152..188	CDD:276937	5/35 (14%)
		TPR repeat	191..222	CDD:276809	10/41 (24%)