DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment gammaSnap2 and gammaSnap1

DIOPT Version :9

Sequence 1:NP_649980.1 Gene:gammaSnap2 / 41239 FlyBaseID:FBgn0266721 Length:283 Species:Drosophila melanogaster
Sequence 2:NP_477469.1 Gene:gammaSnap1 / 37842 FlyBaseID:FBgn0028552 Length:302 Species:Drosophila melanogaster


Alignment Length:297 Identity:200/297 - (67%)
Similarity:242/297 - (81%) Gaps:22/297 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSTLDAKKIEEAEALIGQT---------------DSAANEYAKAGMYFKAATAYRIAKSFDKRKD 50
            ||.:.||||.|||.|:.|.               ||||:||:      |||||||||||:||.|:
  Fly     1 MSGIAAKKIAEAEDLVKQAEKSLKLSMLKWVPDYDSAADEYS------KAATAYRIAKSYDKSKE 59

  Fly    51 CLLKAIDCYENNKSWFHAAKSYEQIILLAKETDKLSEVEDYANRACCLYQQHGSPEAAAAALDKA 115
            |.|||||.|:||||||||||:|||||||:|:.|||.|||:|||::..||||||||||||:|||||
  Fly    60 CFLKAIDAYKNNKSWFHAAKAYEQIILLSKDADKLHEVEEYANKSASLYQQHGSPEAAASALDKA 124

  Fly   116 AKMTESKHPDLALGFYKRALAVVLIGDSTHQASEFASKVSRILVRLKKYEEATKALKKEISLNLQ 180
            ||:|||||||:||.||:.||.|::|.||..||:|:|||||||||:|::|:|||.|||||||||.|
  Fly   125 AKLTESKHPDMALRFYQHALEVIMIEDSVRQAAEYASKVSRILVKLRRYDEATNALKKEISLNQQ 189

  Fly   181 TKSYGQVGRLVVALILVQLTLEDYVDAKKTFKKWGNRCDPQEVNTLQNLLKAFDDEDPELATKML 245
            |:||||:|||||||::|||...|.|:|:|||::|||.|:|:||:|||.||:||||||||||.:||
  Fly   190 TESYGQIGRLVVALVMVQLARGDSVEAEKTFREWGNCCEPEEVSTLQTLLQAFDDEDPELAARML 254

  Fly   246 ASPFIRHMDVEYALLSKDVPLPKGNRQMTKNAVDNAA 282
            |||||||||||||:|||::|||:| .||.|.|.|.||
  Fly   255 ASPFIRHMDVEYAILSKNIPLPQG-IQMEKKAGDTAA 290

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gammaSnap2NP_649980.1 SNAP 29..239 CDD:305195 150/209 (72%)
TPR repeat 29..61 CDD:276937 21/31 (68%)
TPR repeat 65..102 CDD:276937 26/36 (72%)
TPR repeat 105..140 CDD:276937 26/34 (76%)
TPR repeat 144..180 CDD:276937 26/35 (74%)
gammaSnap1NP_477469.1 SNAP 11..248 CDD:305195 161/242 (67%)
TPR repeat 33..70 CDD:276937 27/42 (64%)
TPR repeat 74..111 CDD:276937 26/36 (72%)
TPR repeat 114..149 CDD:276937 26/34 (76%)
TPR repeat 153..187 CDD:276937 24/33 (73%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45469448
Domainoid 1 1.000 92 1.000 Domainoid score I2597
eggNOG 1 0.900 - - E1_KOG1585
Homologene 1 1.000 - - H2838
Inparanoid 1 1.050 99 1.000 Inparanoid score I2192
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG55184
OrthoDB 1 1.010 - - D1540214at2759
OrthoFinder 1 1.000 - - FOG0003744
OrthoInspector 1 1.000 - - mtm6409
orthoMCL 1 0.900 - - OOG6_103437
Panther 1 1.100 - - P PTHR13768
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X4180
1312.810

Return to query results.
Submit another query.