DRSC/TRiP Functional Genomics Resources

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Protein Alignment gammaSnap2 and Napg

DIOPT Version :9

Sequence 1:NP_649980.1 Gene:gammaSnap2 / 41239 FlyBaseID:FBgn0266721 Length:283 Species:Drosophila melanogaster
Sequence 2:XP_011245108.1 Gene:Napg / 108123 MGIID:104561 Length:362 Species:Mus musculus


Alignment Length:323 Identity:90/323 - (27%)
Similarity:151/323 - (46%) Gaps:75/323 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 DSAANEYAKAGMYFKAATAYRIAKSFDKRKDCLLKAIDCYENNKSWFHAAKSYEQIILLAKETDK 84
            ||||:||.      |||.|::.||.|::.||..|:....:|||::.|||||:|||..::.||..|
Mouse    32 DSAASEYG------KAAVAFKNAKQFEQAKDACLREAVAHENNRALFHAAKAYEQAGMMLKEMQK 90

  Fly    85 LSEVEDYANRACCLYQQHGSPEAAAAALDKAAKMTESKHPDLALGFYKRALAVVLIGDSTHQASE 149
            |.|......:|..:|.::|:|:.||.||::|.|:.|:..|:.|:..|::...|....:...||.|
Mouse    91 LPEAVQLIEKASMMYLENGTPDTAAMALERAGKLIENVDPEKAVQLYQQTANVFENEERLRQAVE 155

  Fly   150 FASKVSRILVRLKKYEEATKALKKEISLNLQTKSY------------------------------ 184
            ...|.||:|||.::::||..:::||.::..:.::|                              
Mouse   156 LLGKASRLLVRGRRFDEAALSIQKEKNIYKEIENYPTCYKVEFWSPAERTGTGTKRTGTDPREEE 220

  Fly   185 --GQ-------------VG-----RLVVALILVQLTLEDYVDAKKTFKKWGNRC----------- 218
              |:             ||     :..:|.:||.|...|||.|:        ||           
Mouse   221 HLGKGNPLCVWPTQILAVGTWDRPKKTIAQVLVHLHRNDYVAAE--------RCVRESYSIPGFN 277

  Fly   219 DPQEVNTLQNLLKAFDDEDPELATKMLASPFIRHMDVEYALLSKDVPLPKGNRQMTKNAVDNA 281
            ..::...|:.||:.:|.:|.:..:::..||..::||.:||.|...:.:|.|..:....|...|
Mouse   278 GSEDCAALEQLLEGYDQQDQDQVSEVCNSPLFKYMDNDYAKLGLSLVVPGGGIKKKSPATPQA 340

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gammaSnap2NP_649980.1 SNAP 29..239 CDD:305195 73/270 (27%)
TPR repeat 29..61 CDD:276937 10/31 (32%)
TPR repeat 65..102 CDD:276937 15/36 (42%)
TPR repeat 105..140 CDD:276937 12/34 (35%)
TPR repeat 144..180 CDD:276937 13/35 (37%)
NapgXP_011245108.1 SNAP 8..328 CDD:276937 87/309 (28%)
TPR repeat 30..67 CDD:276937 16/40 (40%)
TPR repeat 71..108 CDD:276937 15/36 (42%)
TPR repeat 111..146 CDD:276937 12/34 (35%)
TPR repeat 150..186 CDD:276937 13/35 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167849671
Domainoid 1 1.000 180 1.000 Domainoid score I3488
eggNOG 1 0.900 - - E1_KOG1585
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H2838
Inparanoid 1 1.050 211 1.000 Inparanoid score I3645
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG55184
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003744
OrthoInspector 1 1.000 - - otm42549
orthoMCL 1 0.900 - - OOG6_103437
Panther 1 1.100 - - O PTHR13768
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X4180
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1413.760

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