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Protein Alignment CAH7 and Car13

DIOPT Version :9

Sequence 1:	NP_001287267.1	Gene:	CAH7 / 41238	FlyBaseID:	FBgn0037788	Length:	304	Species:	Drosophila melanogaster
Sequence 2:	NP_078771.1	Gene:	Car13 / 71934	MGIID:	1931322	Length:	262	Species:	Mus musculus

Alignment Length:	271	Identity:	82/271 - (30%)
Similarity:	129/271 - (47%)	Gaps:	42/271 - (15%)

- Green bases have known domain annotations that are detailed below.

  Fly    22 WGYPDLDN--NQDEPFPKWGGLCDSGKKQSPINLHVKGALKGEFDALKFEN--------YDEHQK 76
            |||.:.:.  :.:|.||    :.| |.:||||.:..|        .:|:::        ||....
Mouse     6 WGYGEHNGPIHWNELFP----IAD-GDQQSPIEIKTK--------EVKYDSSLRPLSIKYDPASA 57

  Fly    77 NLRMVNNGHSIQLSGFDHE--LTLSGGALLQDFVVEQIHMHW------WSEHTINDIRYPLEVHI 133
            .: :.|:|||..:...|.|  ..|.||.|..::.:.|.|:||      .|||.::.:||..|:|:
Mouse    58 KI-ISNSGHSFNVDFDDTEDKSVLRGGPLTGNYRLRQFHLHWGSADDHGSEHVVDGVRYAAELHV 121

  Fly   134 VHRNT-IYPNMTMAANFKDGIVVIGVLYHVSNTPNEAIGSIIKSLGAVKSYDSMNKPVLVADSLA 197
            ||.|: .||:...||:..||:.|:||...:.. .|..:..|...|.::|......: ....|.|.
Mouse   122 VHWNSDKYPSFVEAAHESDGLAVLGVFLQIGE-HNPQLQKITDILDSIKEKGKQTR-FTNFDPLC 184

  Fly   198 VDDLVPSVENYFTYAGSLTTPTCAEAVTWIVLTETFPVTLDQVNEFKEI----EYDEGKQLHNNY 258
               |:||..:|:||.||||.|...|:||||||.:...::..|:..|:.:    |.:....|.:|:
Mouse   185 ---LLPSSWDYWTYPGSLTVPPLLESVTWIVLKQPISISSQQLARFRSLLCTAEGESAAFLLSNH 246

  Fly   259 RELQSENNRAV 269
            |..|....|.|
Mouse   247 RPPQPLKGRRV 257

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.