DRSC/TRiP Functional Genomics Resources

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Protein Alignment CAH7 and ca16b

DIOPT Version :9

Sequence 1:NP_001287267.1 Gene:CAH7 / 41238 FlyBaseID:FBgn0037788 Length:304 Species:Drosophila melanogaster
Sequence 2:XP_001919055.3 Gene:ca16b / 569183 ZFINID:ZDB-GENE-080818-1 Length:1382 Species:Danio rerio


Alignment Length:300 Identity:74/300 - (24%)
Similarity:130/300 - (43%) Gaps:60/300 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 WANEWGYPDLDNNQDEPFPKWGGLCDSGKKQSPIN-LHVKGALKGEFDALKFENYDEHQKN-LRM 80
            ||:  .||:               |.. :.|||:: |..:..:..|...|..:.::....| ..|
Zfish    66 WAS--AYPE---------------CGE-RNQSPVDILDPETQVSQECQELTLDGFETKSSNRTTM 112

  Fly    81 VNNGHSIQLSGFDHELTLSGGALLQDFVVEQIHMHW-------WSEHTINDIRYPLEVHIVHRNT 138
            .|.|.::.:. ..::..:.|..|...|..|::..||       .|||:||..::|:|:.|...|:
Zfish   113 KNTGKTVSIV-LKNDYFVRGAGLPGRFKAEKVEFHWGSTNGSAGSEHSINGKKFPVEMQIYFYNS 176

  Fly   139 -IYPNMTMAANFKDGIVVIGVLYHVSNTPNEAIGSIIKSLGAVKSYDSMNKPVLVADSLAVDDLV 202
             .:.:::.|...:..|..:.|.:.|:...|.|...||..|..|..::....    ..|..:.||:
Zfish   177 DDFDSLSTAIKERRIIAAMAVFFQVATKDNIAAEPIIAGLKRVVHHEKETN----LGSFILRDLL 237

  Fly   203 P-SVENYFTYAGSLTTPTCAEAVTWIVLTETFPV--------------TLDQVNEFKEIEYDEGK 252
            | |:.:|:.|.||||||.|::.|.||:.:.  ||              |.:|.:..|.::|    
Zfish   238 PSSLGSYYRYTGSLTTPPCSKVVEWIIFSR--PVYLSYHQLEAFYSIFTTEQQDHVKSVDY---- 296

  Fly   253 QLHNNYRELQSENNRAV---VLVE--QPEQRSGSAGLTAS 287
             |.||:|.:|..::|.:   .|::  .||..:.:|....|
Zfish   297 -LRNNHRPIQDLDSRRIFKSALMDAWMPETMASAADTETS 335

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CAH7NP_001287267.1 alpha_CA 45..269 CDD:238200 64/248 (26%)
ca16bXP_001919055.3 alpha_CARP_receptor_like 62..314 CDD:239396 69/277 (25%)
FN3 340..417 CDD:214495
Herpes_BLLF1 450..>557 CDD:330317
PTPc 790..1057 CDD:214550
PTPc 1089..1347 CDD:214550
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3338
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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