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Protein Alignment CAH7 and Car5b

DIOPT Version :9

Sequence 1:	NP_001287267.1	Gene:	CAH7 / 41238	FlyBaseID:	FBgn0037788	Length:	304	Species:	Drosophila melanogaster
Sequence 2:	NP_851832.2	Gene:	Car5b / 56078	MGIID:	1926249	Length:	317	Species:	Mus musculus

Alignment Length:	259	Identity:	77/259 - (29%)
Similarity:	132/259 - (50%)	Gaps:	41/259 - (15%)

- Green bases have known domain annotations that are detailed below.

  Fly    36 PKWGG--LCDSGKKQSPINLHVKGALKGEFDALKFENYDEHQKN----------LRMVNNGHS-- 86
            |.|..  |..:|.:|||||:..:.::           ||...|.          |.:.|||:|
Mouse    50 PLWENLDLVPAGDRQSPINIRWRDSV-----------YDPGLKPLTISYDPATCLHIWNNGYSFL 103

  Fly    87 IQLSGFDHELTLSGGALLQDFVVEQIHMHW-----W-SEHTINDIRYPLEVHIVHRNTI-YPNMT 144
            ::......:..:.||.|..::.::|.|.||     | ||||::...||.|:|:||.|.: :.:..
Mouse   104 VEFEDSTDKSVVEGGPLEHNYRLKQFHFHWGAIDAWGSEHTVDSKCYPAELHLVHWNAVKFESFE 168

  Fly   145 MAANFKDGIVVIGVLYHVSNTPNEAIGSIIKSLGAVKSYDSMNKPVLVADSLAVDDLVPSVENYF 209
            .||..::|:.||||...:.....| :..::.:|.::|..|::    :...|.....|:|:..:|:
Mouse   169 DAALEENGLAVIGVFLKLGKHHKE-LQKLVDTLPSIKHKDTL----VEFGSFDPSCLMPTCPDYW 228

  Fly   210 TYAGSLTTPTCAEAVTWIVLTETFPVTLDQVNEFKEI----EYDEGKQLHNNYRELQSENNRAV 269
            ||:||||||..:|:||||:..:...|..||:.:|:.:    |.::.|::.:|:|.||...||.|
Mouse   229 TYSGSLTTPPLSESVTWIIKKQPVEVDRDQLEQFRTLLFTSEGEKEKRMVDNFRPLQPLMNRTV 292

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.