DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CAH7 and ca12

DIOPT Version :9

Sequence 1:NP_001287267.1 Gene:CAH7 / 41238 FlyBaseID:FBgn0037788 Length:304 Species:Drosophila melanogaster
Sequence 2:NP_001016431.1 Gene:ca12 / 549185 XenbaseID:XB-GENE-1015246 Length:335 Species:Xenopus tropicalis


Alignment Length:318 Identity:90/318 - (28%)
Similarity:153/318 - (48%) Gaps:49/318 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 LIALSLIVCCSVSFSWANEWGYPDLDNNQDEPFPKWGGLCDSGKKQSPINLHVKGALKGEFDA-- 65
            |:.|:|..|.:.  |..:.|.|  :....::.:||....| .|..||||::| :..|  ::|:  
 Frog     6 LVLLALPSCQAA--SEGHGWAY--IGTKGEKSWPKNYEFC-GGVYQSPIDIH-QDIL--QYDSSL 62

  Fly    66 --LKFENYD-EHQKNLRMVNNGHSIQLSGFDHELTLSGGALLQDFVVEQIHMHW-------WSEH 120
              :|...|: ...::..:.||||::|:|...   |:........:...|:|:||       .|||
 Frog    63 QPVKLNGYNVSPAESFTLSNNGHTVQMSLVP---TMQIKIAPFHYTASQLHLHWGQRGTQKGSEH 124

  Fly   121 TINDIRYPLEVHIVHRNT-IYPNMTMAANFKDGIVVIGVLYHVS--NTPNEAIGSIIKSLGAVKS 182
            .|...|:..|||:|:.|: .|.::|.|....||:.|:|:|..|.  |...|.|.|.:.|:|    
 Frog   125 CIEGKRFAGEVHLVNYNSDKYSDITTAMKESDGLAVLGILLEVGPFNPTFEKIISQLHSIG---- 185

  Fly   183 YDSMNKPVLVADSLAVDDLVPS-VENYFTYAGSLTTPTCAEAVTWIVLTETFPVTLDQVNEFKEI 246
              ..::.|.:| ...|.:|:|. ::.|:.|.||||||.|..:|.|.|......::.:|:...:..
 Frog   186 --YKDQSVQIA-GFNVQELLPKRLDEYYRYEGSLTTPPCYPSVLWTVFRNPVTISEEQLITLETA 247

  Fly   247 EY----DEGKQLHNNYRELQSENNRAVVLVEQPEQRSGSAGLTASVS----LGLMTLI 296
            .|    :|..|:.||||:||...:|.|.:       |...|:..:::    ||::.:|
 Frog   248 LYSTDRNESVQMTNNYRQLQPHGDRLVSV-------SFREGVVLTIALACLLGVLVII 298

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CAH7NP_001287267.1 alpha_CA 45..269 CDD:238200 74/243 (30%)
ca12NP_001016431.1 alpha_CA_XII_XIV 30..278 CDD:239400 78/268 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1377476at2759
OrthoFinder 1 1.000 - - FOG0000047
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X57
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.010

Return to query results.
Submit another query.