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Protein Alignment CAH7 and Car9

DIOPT Version :9

Sequence 1:	NP_001287267.1	Gene:	CAH7 / 41238	FlyBaseID:	FBgn0037788	Length:	304	Species:	Drosophila melanogaster
Sequence 2:	NP_647466.2	Gene:	Car9 / 230099	MGIID:	2447188	Length:	437	Species:	Mus musculus

Alignment Length:	250	Identity:	70/250 - (28%)
Similarity:	116/250 - (46%)	Gaps:	27/250 - (10%)

- Green bases have known domain annotations that are detailed below.

  Fly    35 FPKWGGLCDSGKKQSPINLHV-KGALKGEFDALKFENYD-EHQKNLRMVNNGHSIQLSGFDHELT 97
            :|:....| :|:.|||:::.: :.|.......|:...|: :....|.:.||||::|       ||
Mouse   128 WPQVSPAC-AGRFQSPVDIRLERTAFCRTLQPLELLGYELQPLPELSLSNNGHTVQ-------LT 184

  Fly    98 LSGGALL-----QDFVVEQIHMHW------WSEHTINDIRYPLEVHIVHRNTIYPNMTMAANFKD 151
            |..|..:     |::...|:|:||      .||||:|..|:|.|:|:||.:|.:..:..|.....
Mouse   185 LPPGLKMALGPGQEYRALQLHLHWGTSDHPGSEHTVNGHRFPAEIHVVHLSTAFSELHEALGRPG 249

  Fly   152 GIVVIGVLYHVSNTPNEAIGSIIKSLGAVKSYDSMNKPVLVADSLAVDDLVPS-VENYFTYAGSL 215
            |:.|:......|...|.|...::..|..:....|.    :....|.|..|:|| :..|:.|.|||
Mouse   250 GLAVLAAFLQESPEENSAYEQLLSHLEEISEEGSK----IEIPGLDVSALLPSDLSRYYRYEGSL 310

  Fly   216 TTPTCAEAVTWIVLTETFPVTLDQVNEFK-EIEYDEGKQLHNNYRELQSENNRAV 269
            |||.|::.|.|.|..||..::..|::... .:......:|..|:|..|..|.|.:
Mouse   311 TTPPCSQGVIWTVFNETVKLSAKQLHTLSVSLWGPRDSRLQLNFRATQPLNGRTI 365

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.