DRSC/TRiP Functional Genomics Resources

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Protein Alignment CAH7 and cah-1

DIOPT Version :9

Sequence 1:NP_001287267.1 Gene:CAH7 / 41238 FlyBaseID:FBgn0037788 Length:304 Species:Drosophila melanogaster
Sequence 2:NP_001309492.1 Gene:cah-1 / 186231 WormBaseID:WBGene00000279 Length:303 Species:Caenorhabditis elegans


Alignment Length:301 Identity:86/301 - (28%)
Similarity:135/301 - (44%) Gaps:50/301 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 HLIALSLIVCCSVS-------FSWANE---------WGYPDLDNNQDEPFPKWGGLCDSGKKQSP 50
            |.....:|:.|.:|       :.|:.:         ||..:.|         | .:|..|:.|||
 Worm     7 HFPLFLIILTCHISPLKSSQNYQWSYDSDVFGGPHFWGLVEKD---------W-WMCKKGRLQSP 61

  Fly    51 INLHVKGALKGEFDA-LKFENYDEHQKNLRMVNNGHSIQLS-GFDHE---LTLSGGALL-QDFVV 109
            |::.....|   ||| :|....|:.......||.|..:::. |:..:   :.::.|.|. ..:.|
 Worm    62 IDIQPDRLL---FDASVKPVRLDKLPVVSEFVNTGQMVRVRIGYSSKKPSVNITSGPLYGYRYRV 123

  Fly   110 EQIHMHW------WSEHTINDIRYPLEVHIVHRNT-IYPNMTMAANFKDGIVVIGVLYHVSNTPN 167
            ::|..|.      .||||||..|:|:||.:|..|| :|||.|.|:....||.::.||.......|
 Worm   124 QRIDFHMGRKNENGSEHTINGRRFPMEVQLVAYNTDLYPNFTSASKSPHGIAILSVLVDFGPETN 188

  Fly   168 EAIGSIIKSLGAVKSYDSMNKPVLVADSLAVDDLVPSVENYFTYAGSLTTPTCAEAVTWIVLTET 232
            :   .:||...|..|....::.|.:|| .....|:|...:..||.||||:|.|.|.||||:|.:.
 Worm   189 Q---ELIKLTIATASISYKDQRVQLAD-FEPWRLLPFTRDIITYEGSLTSPGCHETVTWIILNQP 249

  Fly   233 FPVTLDQVNEFKEI----EYDEGKQLHNNYRELQSENNRAV 269
            ..:..:...|:..:    |..|...:..|:|::|..|||.|
 Worm   250 IFIKKEHFEEWSHLYLSMEGAEKVPVAPNFRKIQETNNRLV 290

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CAH7NP_001287267.1 alpha_CA 45..269 CDD:238200 75/240 (31%)
cah-1NP_001309492.1 alpha_CARP_X_XI_like 39..295 CDD:239395 81/269 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3338
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S4255
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1377476at2759
OrthoFinder 1 1.000 - - FOG0000047
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.770

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