back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment CAH7 and Car6

DIOPT Version :9

Sequence 1:	NP_001287267.1	Gene:	CAH7 / 41238	FlyBaseID:	FBgn0037788	Length:	304	Species:	Drosophila melanogaster
Sequence 2:	NP_033932.2	Gene:	Car6 / 12353	MGIID:	1333786	Length:	317	Species:	Mus musculus

Alignment Length:	269	Identity:	80/269 - (29%)
Similarity:	125/269 - (46%)	Gaps:	33/269 - (12%)

- Green bases have known domain annotations that are detailed below.

  Fly    20 NEWGYPDLD----NNQDEPFPKWGGLCDSGKKQSPINLHVKGAL-KGEFDALKFENYDEHQKNLR 79
            ::|.|...|    :...|.:|..|     |::||||::..:..: ......|...||::......
Mouse    19 SDWSYSGDDGVGESQWSEQYPSCG-----GERQSPIDVKTEEVMFNPSLKPLSLVNYEKENLEFT 78

  Fly    80 MVNNGHSIQL----SGFDHELTLSGGALLQDFVVEQIHMHW----W----SEHTINDIRYPLEVH 132
            |.||||::.:    |.:   |..|.|.   :|:.:..|.||    |    |||||:.||..:|.|
Mouse    79 MTNNGHTVSIDLPPSMY---LETSDGT---EFISKAFHFHWGGRDWELSGSEHTIDGIRSIMEAH 137

  Fly   133 IVHRNTIYPNMTMAANFKDGIVVIGVLYHVSNTPNEAIGSIIKSLGAVKSYDSMNKPVLVADSLA 197
            .||.|..|.....|.:.|:|:.|:.||:.:.........|.|  :.|:|:.:...:...:.|: .
Mouse   138 FVHFNKEYGTYENAKDQKNGLAVLAVLFKIDEYAENTYYSDI--ISALKNIEKPGETTTLKDT-T 199

  Fly   198 VDDLVP-SVENYFTYAGSLTTPTCAEAVTWIVLTETFPVTLDQVNEFKEIEYDEGKQ-LHNNYRE 260
            :.:|:| .|.:|:||.||||||.|.|.|.|.||.:...::..||...:....|.... :.|.||.
Mouse   200 IRNLLPKDVHHYYTYPGSLTTPPCTENVQWFVLRDKVTLSKAQVVTIENSVMDHNNNTIQNGYRS 264

  Fly   261 LQSENNRAV 269
            .|..|:|.|
Mouse   265 TQPNNHRVV 273

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.