DRSC/TRiP Functional Genomics Resources

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Protein Alignment CAH7 and Car4

DIOPT Version :9

Sequence 1:NP_001287267.1 Gene:CAH7 / 41238 FlyBaseID:FBgn0037788 Length:304 Species:Drosophila melanogaster
Sequence 2:NP_031633.1 Gene:Car4 / 12351 MGIID:1096574 Length:305 Species:Mus musculus


Alignment Length:316 Identity:92/316 - (29%)
Similarity:142/316 - (44%) Gaps:50/316 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 LIALSLIVCCSVSFSWANEWGYPDLDNNQDEPFPKWGGLCDSGKKQSPINL-HVKGALKGEFDAL 66
            |:||:.:...:....|..|....|..::...| .||.|.|.. .:|||||: ..:..:.......
Mouse     7 LLALAYVAPSTEDSGWCYEIQTKDPRSSCLGP-EKWPGACKE-NQQSPINIVTARTKVNPRLTPF 69

  Fly    67 KFENYDEHQKNLRMVNNGHSIQLSGFDHELTLSGGA------LLQDFVVEQIHMHW------WSE 119
            ....||:.|: ..:.||.|::       |:||.|||      |...:...|:|:||      .||
Mouse    70 ILVGYDQKQQ-WPIKNNQHTV-------EMTLGGGACIIGGDLPARYEAVQLHLHWSNGNDNGSE 126

  Fly   120 HTINDIRYPLEVHIVHRNTIYPNMTMAANFKDGIVVIGVLYHVSNTPNEAIGSIIKSLGAVKSYD 184
            |:|:...:.:|:||||:..    .:...:.||...|:..:..|.:..|:....::::|      .
Mouse   127 HSIDGRHFAMEMHIVHKKL----TSSKEDSKDKFAVLAFMIEVGDKVNKGFQPLVEAL------P 181

  Fly   185 SMNKP---VLVADSLAVDDLVPSVE--NYFTYAGSLTTPTCAEAVTWIVLTETFPVTLDQVNEF- 243
            |::||   ..|.:|...|.|.||.:  .||.|.||||||.|.|.|.|.|..:...:..:|..|| 
Mouse   182 SISKPHSTSTVRESSLQDMLPPSTKMYTYFRYNGSLTTPNCDETVIWTVYKQPIKIHKNQFLEFS 246

  Fly   244 KEIEYDEGKQLH--NNYRELQSENNRAVVLVEQPEQRSGSAGLTASVSLGLMTLIL 297
            |.:.|||.::|:  :|.|.||....|.|.....|.|         .:||.|.||::
Mouse   247 KNLYYDEDQKLNMKDNVRPLQPLGKRQVFKSHAPGQ---------LLSLPLPTLLV 293

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
CAH7NP_001287267.1 alpha_CA 45..269 CDD:238200 73/244 (30%)
Car4NP_031633.1 alpha_CA_IV_XV_like 48..276 CDD:239391 74/245 (30%)