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Protein Alignment CAH7 and Car3

DIOPT Version :9

Sequence 1:	NP_001287267.1	Gene:	CAH7 / 41238	FlyBaseID:	FBgn0037788	Length:	304	Species:	Drosophila melanogaster
Sequence 2:	NP_031632.2	Gene:	Car3 / 12350	MGIID:	88270	Length:	260	Species:	Mus musculus

Alignment Length:	279	Identity:	79/279 - (28%)
Similarity:	117/279 - (41%)	Gaps:	53/279 - (18%)

- Green bases have known domain annotations that are detailed below.

  Fly    19 ANEWGYPDLDNNQDEPFPKWGGL--CDSGKKQSPINLHVKGALKGEFDALKFENYDEHQKNLR-- 79
            |.||||.. .|..|.    |..|  ...|..||||.||.|..              :|..:|:
Mouse     2 AKEWGYAS-HNGPDH----WHELYPIAKGDNQSPIELHTKDI--------------KHDPSLQPW 47

  Fly    80 -----------MVNNGHSIQL---SGFDHELTLSGGALLQDFVVEQIHMHW------WSEHTIND 124
                       ::|||.:.::   ..:|..: |.||.|...:.:.|.|:||      .||||::.
Mouse    48 SASYDPGSAKTILNNGKTCRVVFDDTYDRSM-LRGGPLSGPYRLRQFHLHWGSSDDHGSEHTVDG 111

  Fly   125 IRYPLEVHIVHRNTIYPNMTMAANFKDGIVVIGVLYHVSNTPNEAIGSIIKSLGAVKSYDSMNKP 189
            ::|..|:|:||.|..|.....|....|||.|:|:...:.....| ...::.:|..:|: .....|
Mouse   112 VKYAAELHLVHWNPKYNTFGEALKQPDGIAVVGIFLKIGREKGE-FQILLDALDKIKT-KGKEAP 174

  Fly   190 VLVADSLAVDDLVPSVENYFTYAGSLTTPTCAEAVTWIVLTETFPVTLDQVNE----FKEIEYDE 250
            ....|...   |.|:..:|:||.||.|||.|.|.:.|::|.|...|:.||:.:    |...|.:.
Mouse   175 FTHFDPSC---LFPACRDYWTYHGSFTTPPCEECIVWLLLKEPMTVSSDQMAKLRSLFSSAENEP 236

  Fly   251 GKQLHNNYRELQSENNRAV 269
            ...|..|:|..|....|.|
Mouse   237 PVPLVGNWRPPQPVKGRVV 255

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.