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Protein Alignment CAH7 and Car2

DIOPT Version :9

Sequence 1:	NP_001287267.1	Gene:	CAH7 / 41238	FlyBaseID:	FBgn0037788	Length:	304	Species:	Drosophila melanogaster
Sequence 2:	NP_001344263.1	Gene:	Car2 / 12349	MGIID:	88269	Length:	260	Species:	Mus musculus

Alignment Length:	280	Identity:	81/280 - (28%)
Similarity:	137/280 - (48%)	Gaps:	55/280 - (19%)

- Green bases have known domain annotations that are detailed below.

  Fly    19 ANEWGY-----PDLDNNQDEPFPKWGGLCDSGKKQSPINLHVKGALKGEFD-ALK--FENYDEHQ 75
            ::.|||     |:   |..:.||     ..:|.:|||:::....|   :.| ||:  ..:||: .
Mouse     2 SHHWGYSKHNGPE---NWHKDFP-----IANGDRQSPVDIDTATA---QHDPALQPLLISYDK-A 54

  Fly    76 KNLRMVNNGHSIQLSGFDHE--LTLSGGALLQDFVVEQIHMHW------WSEHTINDIRYPLEVH 132
            .:..:||||||..:...|.:  ..|.||.|...:.:.|.|.||      .||||:|..:|..|:|
Mouse    55 ASKSIVNNGHSFNVEFDDSQDNAVLKGGPLSDSYRLIQFHFHWGSSDGQGSEHTVNKKKYAAELH 119

  Fly   133 IVHRNTIYPNMTMAANFKDGIVVIGVLYHVSNTPNEAIGSIIKSLGAVK---------SYDSMNK 188
            :||.||.|.:...|....||:.|:|:...: ...::.:..::::|.::|         ::|..:
Mouse   120 LVHWNTKYGDFGKAVQQPDGLAVLGIFLKI-GPASQGLQKVLEALHSIKTKGKRAAFANFDPCS- 182

  Fly   189 PVLVADSLAVDDLVPSVENYFTYAGSLTTPTCAEAVTWIVLTETFPVTLDQVNEFKEIEYDE--- 250
                        |:|...:|:||.||||||...|.||||||.|...|:.:|::.|:.:.::|
Mouse   183 ------------LLPGNLDYWTYPGSLTTPPLLECVTWIVLREPITVSSEQMSHFRTLNFNEEGD 235

  Fly   251 -GKQLHNNYRELQSENNRAV 269
             .:.:.:|:|..|...||.:
Mouse   236 AEEAMVDNWRPAQPLKNRKI 255

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.