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Protein Alignment CAH7 and Car1

DIOPT Version :9

Sequence 1:	NP_001287267.1	Gene:	CAH7 / 41238	FlyBaseID:	FBgn0037788	Length:	304	Species:	Drosophila melanogaster
Sequence 2:	NP_001077426.1	Gene:	Car1 / 12346	MGIID:	88268	Length:	261	Species:	Mus musculus

Alignment Length:	275	Identity:	79/275 - (28%)
Similarity:	129/275 - (46%)	Gaps:	48/275 - (17%)

- Green bases have known domain annotations that are detailed below.

  Fly    21 EWGYPDLDNNQDEPFPKWGGL--CDSGKKQSPINLHVKGALKGEFDALKFENYDEHQKNL----- 78
            :|||.. :|..|:    |..|  ..:|..||||::....|           |:|...|.|
Mouse     5 DWGYGS-ENGPDQ----WSKLYPIANGNNQSPIDIKTSEA-----------NHDSSLKPLSISYN 53

  Fly    79 -----RMVNNGHSIQLSGFD---HELTLSGGALLQDFVVEQIHMHW------WSEHTINDIRYPL 129
                 .:||.|||..:. ||   ::..|.||.|...:.:.|.|.||      .||||::..||..
Mouse    54 PATAKEIVNVGHSFHVI-FDDSSNQSVLKGGPLADSYRLTQFHFHWGNSNDHGSEHTVDGTRYSG 117

  Fly   130 EVHIVHRNTI-YPNMTMAANFKDGIVVIGVLYHVSNTPNEAIGSIIKSLGAVKSYDSMNKPVLVA 193
            |:|:||.|:. |.:.:.|.:..||:.::|||..| ...|.::..::.:|.:||: .....|....
Mouse   118 ELHLVHWNSAKYSSASEAISKADGLAILGVLMKV-GPANPSLQKVLDALNSVKT-KGKRAPFTNF 180

  Fly   194 DSLAVDDLVPSVENYFTYAGSLTTPTCAEAVTWIVLTETFPVTLDQVNEFKEI----EYDEGKQL 254
            |.   ..|:||..:|:||.||||.|...|:|||::..::..::.:|:.:.:.:    |.:....:
Mouse   181 DP---SSLLPSSLDYWTYFGSLTHPPLHESVTWVICKDSISLSPEQLAQLRGLLSSAEGEPAVPV 242

  Fly   255 HNNYRELQSENNRAV 269
            .:|:|..|....|.|
Mouse   243 LSNHRPPQPLKGRTV 257

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.