DRSC/TRiP Functional Genomics Resources

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Protein Alignment CAH7 and ca12

DIOPT Version :9

Sequence 1:NP_001287267.1 Gene:CAH7 / 41238 FlyBaseID:FBgn0037788 Length:304 Species:Drosophila melanogaster
Sequence 2:XP_009296363.1 Gene:ca12 / 100537787 ZFINID:ZDB-GENE-080815-4 Length:505 Species:Danio rerio


Alignment Length:313 Identity:97/313 - (30%)
Similarity:147/313 - (46%) Gaps:53/313 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 IALSLIVCCSVSFSWANEWGYPDLDNNQDEP--FPKWGGLCDSGKKQSPINL--HVKGALKGEFD 64
            |.|.:::.|.::.: ..:|.|..||...|.|  :|..||..     ||||:.  |:.     .:|
Zfish     5 IILIILIACPLALT-GRKWTYNGLDGEHDWPTNYPFCGGAF-----QSPIDFQTHLL-----RYD 58

  Fly    65 ----ALKFENYD-EHQKNLRMVNNGHSIQLSGFDHELTLSGGALLQDFVVEQIHMHW-------W 117
                .::.:||: ...:.|.:.|||||:|||...|....|   |...:...|:|.||       .
Zfish    59 PNLPPIQVQNYNLSTSEQLTLGNNGHSVQLSLPSHMYISS---LPHRYSAAQLHFHWGSSNLLTG 120

  Fly   118 SEHTINDIRYPLEVHIVHRNT-IYPNMTMAANFKDGIVVIGVLYHVSNTPNEAIGSIIKSLGAVK 181
            ||||:|..::..|:|:||.|: .|||::||.:..||:.|:||...:... |.|...:.:.:..||
Zfish   121 SEHTVNGKQFAGEMHVVHFNSDKYPNVSMAVDKHDGLAVLGVFIEIGEA-NPAFDKLFRFISGVK 184

  Fly   182 SYD-SMNKPVLVADSLAVDDLVPSVENYFTYAGSLTTPTCAEAVTWIVLTETFPVTLDQVNEFKE 245
            ..| .:..|.....:|..|.|    :.|:.|.||||||.|..:|.|.|..:  |||:.: .:|..
Zfish   185 YRDQKIQVPAFNIRALLPDRL----DQYYRYDGSLTTPPCYPSVLWTVFRK--PVTISR-KQFLA 242

  Fly   246 I---------EYDEGKQLHNNYRELQSENNRAVVLVEQPEQRSGSAGLTASVS 289
            :         :......||.|||:.|..:|| ||||   ..|.|..|:.:..|
Zfish   243 LATALYASFAQDSPSMPLHENYRKSQLPDNR-VVLV---SFREGLHGILSVAS 291

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CAH7NP_001287267.1 alpha_CA 45..269 CDD:238200 77/248 (31%)
ca12XP_009296363.1 alpha_CA 29..279 CDD:294017 86/274 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1377476at2759
OrthoFinder 1 1.000 - - FOG0000047
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X57
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.920

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