DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CAH7 and ca9

DIOPT Version :9

Sequence 1:NP_001287267.1 Gene:CAH7 / 41238 FlyBaseID:FBgn0037788 Length:304 Species:Drosophila melanogaster
Sequence 2:XP_031750918.1 Gene:ca9 / 100498132 XenbaseID:XB-GENE-6033533 Length:392 Species:Xenopus tropicalis


Alignment Length:327 Identity:90/327 - (27%)
Similarity:145/327 - (44%) Gaps:60/327 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 ANEWGYPDLDNNQDEPFPKWGGLCDSGKKQSPINLHVKGALKGEFDA----LKFENYD-EHQKNL 78
            ::.|.|.|: :..|..:|..|     |.:|||||:.....   .||:    :....|: ...:.|
 Frog    42 SHHWNYQDI-HQWDSDYPHCG-----GPEQSPINVVTSAT---TFDSNLRPILLSGYNVPPSRTL 97

  Fly    79 RMVNNGHSIQLSGFDHELTLSGGALLQDFVVEQIHMHW------WSEHTINDIRYPLEVHIVHRN 137
            .:.||||::.|...|..|.:  |.|.|.:...|:|.||      .||||:|..|:|.|:|:||.:
 Frog    98 SLENNGHTVVLDLPDSLLII--GGLPQTYRATQLHFHWGSQDDPGSEHTVNGQRFPGEMHVVHYS 160

  Fly   138 TIYPNMTMAANFKDGIVVIGVLYHVSNTPNEAIGSIIKSL-GAVKSYDSMNKPVLVADSLAVDDL 201
            ..|.:.|.|:....|:.|:||........|.|..:::..| ...:..:|:..|     ...:..|
 Frog   161 AEYSSATEASTHPGGLAVLGVFIQEGEEENPAFQNLLPYLQNITEEGESIEIP-----GFDIRGL 220

  Fly   202 VPS-VENYFTYAGSLTTPTCAEAVTWIVLTETFPVTLDQVNEFKE-IEYDEGKQLHNNYRELQSE 264
            :|. ::.|:.|.||||||.|.:.|.|.:..:|..::.:|::..:: |..|....|.||:|..||.
 Frog   221 LPQRLDRYYHYDGSLTTPPCYQTVNWTLFNQTILLSPEQMDLLEDTIHADHDHILQNNFRAPQSL 285

  Fly   265 NNRAVVLVEQPE-----------------------------QRSGSAGLTASVSLGLMTLILAGQ 300
            |.|.|:....|:                             |.:|.: :.||:|.|.|..|:.|.
 Frog   286 NGRLVLSSFSPKVSGRRLPGAAPNPAGTSPAPDNSSPNHSSQGTGES-VEASLSTGDMLAIIFGV 349

  Fly   301 KF 302
            .|
 Frog   350 LF 351

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CAH7NP_001287267.1 alpha_CA 45..269 CDD:238200 72/237 (30%)
ca9XP_031750918.1 alpha_CA 52..294 CDD:412109 76/256 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1377476at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X57
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
33.010

Return to query results.
Submit another query.