DRSC/TRiP Functional Genomics Resources

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Protein Alignment CAH7 and ca3

DIOPT Version :9

Sequence 1:NP_001287267.1 Gene:CAH7 / 41238 FlyBaseID:FBgn0037788 Length:304 Species:Drosophila melanogaster
Sequence 2:XP_002939197.2 Gene:ca3 / 100496328 XenbaseID:XB-GENE-1007186 Length:262 Species:Xenopus tropicalis


Alignment Length:286 Identity:80/286 - (27%)
Similarity:125/286 - (43%) Gaps:69/286 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 NEWGYPDLDNNQD---EPFPKWGGLCDSGKKQSPINLHVKGALKGEFDALKFENYDEHQKNLR-- 79
            ::|||.. .|..|   |.||     ...|.:||||.|              ...|.:|...||  
 Frog     5 HDWGYAS-HNGPDTWAEYFP-----AAKGDQQSPIEL--------------LTRYIKHDPTLRPW 49

  Fly    80 -----------MVNNGHSIQLSGFD---HELTLSGGALLQDFVVEQIHMHW------WSEHTIND 124
                       :||:|.:.::. ||   .:..:..|.:...:.:.|:..||      .|||.|:.
 Frog    50 TSTYHPSTSLTVVNDGTTCRVV-FDDSTDKSVIKDGPMNGTYRLRQLQFHWGSSDDHGSEHVIDG 113

  Fly   125 IRYPLEVHIVHRNTIYPNMTMAANFKDGIVVIGVLYHVSNT-PN-----EAIGSIIKSLGAVKSY 183
            .||..|:|.:|.|:.|.|:|.|....||:.:|.|...:... |:     ||: ..||:.|....:
 Frog   114 FRYAGEMHFIHWNSKYDNITEAKKHPDGVAIIAVFLKIGKAKPHLKLVLEAL-DCIKNKGKKAHF 177

  Fly   184 DSMNKPVLVADSLAVDDLVPSVENYFTYAGSLTTPTCAEAVTWIVLTETFPVTLDQVNEFKEIEY 248
            ...:..:          |.||..:|:||.||.|||.|.|.|||::|:|...|:.:|:.:|:.: |
 Frog   178 TDFDPTI----------LFPSSRDYWTYQGSFTTPPCEECVTWLLLSEPITVSPEQMEKFRSV-Y 231

  Fly   249 D--EGK-QLH--NNYRELQSENNRAV 269
            .  ||: :.|  :|:|..|....|.:
 Frog   232 STLEGEIECHMVDNFRPPQPVKGREI 257

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CAH7NP_001287267.1 alpha_CA 45..269 CDD:238200 72/256 (28%)
ca3XP_002939197.2 alpha_CA 4..261 CDD:412109 80/286 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1377476at2759
OrthoFinder 1 1.000 - - FOG0000047
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X57
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.010

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