DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CAH7 and ca11

DIOPT Version :9

Sequence 1:NP_001287267.1 Gene:CAH7 / 41238 FlyBaseID:FBgn0037788 Length:304 Species:Drosophila melanogaster
Sequence 2:XP_002938168.2 Gene:ca11 / 100493884 XenbaseID:XB-GENE-6037596 Length:330 Species:Xenopus tropicalis


Alignment Length:313 Identity:80/313 - (25%)
Similarity:136/313 - (43%) Gaps:55/313 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 LIALSLIVCCSVSFSWANE----WGYPDLDNNQDEPFPK-WG------GLCDSGKKQSPINLHVK 56
            ::..|..:..:..||.|..    |.|.:.......|.|. ||      .||..||:|||||::..
 Frog    11 ILQASAAIYTAAQFSPAKTYEEWWAYKEAVQGSFVPGPAFWGLVNSAWNLCTIGKRQSPININTS 75

  Fly    57 GALKGEFDALKFENYDEHQKNLRMVNNGHSIQLSGFDHE--------------LTLSGGALLQDF 107
            ..:           :|.....||:...|.::  ||..|.              :.:|||.||.:.
 Frog    76 QII-----------FDPFLPPLRLSMTGTTV--SGTMHNTGRHVSFRLDKEQPVNISGGPLLYNH 127

  Fly   108 VVEQIHMHW------WSEHTINDIRYPLEVHIVHRN-TIYPNMTMAANFKDGIVVIGVLYHVSNT 165
            .:|::.:|:      .|||.:|......||.::|.| .:|.|:|.|:...:|:.||.:..:|::.
 Frog   128 RLEEVMLHFGSENSIGSEHLMNKETSAGEVQLIHYNQDLYSNVTEASRNPNGLAVISLFLNVADN 192

  Fly   166 PNEAIGSIIKSLGAVKSYDSMNKPVLVADSLAVDDLVPSVENYFTYAGSLTTPTCAEAVTWIVLT 230
            .|..:..:: :...:......|:...:.| |:::||.|....:.||.||:|.|.|.|.|||||:.
 Frog   193 SNSFLNRML-NRETITRISFRNEATYIQD-LSIEDLYPDTFGFLTYQGSMTIPPCYETVTWIVID 255

  Fly   231 ETFPVTLDQVNEFKEIEYDEGKQLHNNYRELQSENNRAVVLVEQPEQRSGSAG 283
            ....:|..|::..:.:..::..|:..:    .|:|.|.|    ||....|..|
 Frog   256 RPLNITSMQMHSLRLLSQNQPSQIFQS----MSDNFRPV----QPLFHRGLRG 300

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CAH7NP_001287267.1 alpha_CA 45..269 CDD:238200 63/244 (26%)
ca11XP_002938168.2 alpha_CARP_X_XI_like 47..303 CDD:239395 73/277 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1377476at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

Return to query results.
Submit another query.