DRSC/TRiP Functional Genomics Resources

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Protein Alignment CAH7 and ca4.2

DIOPT Version :9

Sequence 1:NP_001287267.1 Gene:CAH7 / 41238 FlyBaseID:FBgn0037788 Length:304 Species:Drosophila melanogaster
Sequence 2:XP_002933882.2 Gene:ca4.2 / 100489625 XenbaseID:XB-GENE-5952677 Length:302 Species:Xenopus tropicalis


Alignment Length:299 Identity:91/299 - (30%)
Similarity:138/299 - (46%) Gaps:66/299 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 LIALSLIV-CCSVSFSWANE-------------WG--YPDLDNNQDEPFPKWGGLCDSGKKQSPI 51
            |::||||. ..:....|..|             ||  ||....|.                ||||
 Frog    10 LVSLSLIKDSAAAEGDWCYEIQGHQTLGCGPRFWGEHYPTCAKNH----------------QSPI 58

  Fly    52 NLHVKGALKGEFD-ALK---FENYDEHQKNLRMVNNGHSIQL---SGFDHELTLSGGALLQDFVV 109
            |:..|   |..|| |||   |:.|:...::|.:.|||||.|:   :|.:    :|||.|.:.::.
 Frog    59 NVLTK---KAVFDKALKPFHFKGYNITGRHLNITNNGHSAQVDLPTGIE----ISGGGLSETYIA 116

  Fly   110 EQIHMHW------WSEHTINDIRYPLEVHIVHRNTIYPNMTMAANFKDGIVVIGVLYHVSNTPNE 168
            .|.|.||      .||||::..:||:|:||||:     ..|....|.| :.|:|..|..:...|.
 Frog   117 AQFHFHWGSDEFYGSEHTVDGEKYPMELHIVHK-----RKTSTGGFGD-LAVLGFFYEETAKNNT 175

  Fly   169 AIGSIIKSLGAVKSYDSMNKPVLVADSLAVDDLVP--SVENYFTYAGSLTTPTCAEAVTWIVLTE 231
            ...|:|:|||.:.:.|....     .|..:|.|:|  .::.|:.|.||||||.|.|.|.|.:...
 Frog   176 EYNSLIESLGHISTKDGYKN-----FSATLDKLIPINELKVYYRYNGSLTTPPCNETVIWTLFNT 235

  Fly   232 TFPVTLDQVNEF-KEIEYDEGKQLHNNYRELQSENNRAV 269
            |..::..|:..| ..:.:.|.:::..|:|.:|..::|.|
 Frog   236 TIKLSKLQLQAFHNSLNFTEKQRMVENFRPVQKRSDRIV 274

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CAH7NP_001287267.1 alpha_CA 45..269 CDD:238200 78/239 (33%)
ca4.2XP_002933882.2 alpha_CA_IV_XV_like 52..275 CDD:239391 80/257 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 134 1.000 Domainoid score I4958
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 134 1.000 Inparanoid score I4459
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1377476at2759
OrthoFinder 1 1.000 - - FOG0000047
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR18952
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X57
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
66.160

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