DRSC/TRiP Functional Genomics Resources

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Protein Alignment Alp13 and Akp3

DIOPT Version :9

Sequence 1:NP_649978.2 Gene:Alp13 / 41236 FlyBaseID:FBgn0037786 Length:479 Species:Drosophila melanogaster
Sequence 2:NP_073171.2 Gene:Akp3 / 64621 RGDID:621650 Length:558 Species:Rattus norvegicus


Alignment Length:512 Identity:132/512 - (25%)
Similarity:223/512 - (43%) Gaps:115/512 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 LLCIGFMTRYEVENDVANVADVDYWKDKVATSQKIWYDKGIDELNEALRPQDL-TYPKNVRIFVI 99
            ||.:||  |.::...|..|.:         .:...|..|..|.||.|.:.|.: |..||:.||:.
  Rat     7 LLLLGF--RLQLSLSVIPVEE---------ENPAFWNQKAADALNVAKKLQPIQTSAKNLIIFLG 60

  Fly   100 QGIDGRDWAAFRFPTSDASR-------GN----TNFIWDRFPHLARLKN-SCSQQFPCQVASVSR 152
            .|:.        .||..|:|       ||    |....|.||::|..|. |..:|.| ..||.:.
  Rat    61 DGMG--------VPTVTATRILKGQLEGNLGPETPLAMDHFPYMALSKTYSVDRQVP-DSASTAT 116

  Fly   153 ALWLGIPLDKVPDNQQDCGRL--FNATQG--PISILRQAQLAGLRTGFVTTQRI--TGPTGAALG 211
            |...|:..:..........|.  .|.|.|  .:|::.:|:.||...|.|||.|:  ..|.|..:.
  Rat   117 AYLCGVKTNYKTIGVSAAARFDQCNTTFGNEVLSVMYRAKKAGKSVGVVTTTRVQHASPAGTYVH 181

  Fly   212 NANGNFECDESMPLNSIKSGCQDIAQQLISDETGKFLNVLIGGGRQ-MLSSLVPNTKYDPVDEML 275
            ..|.|:..|..||.::::.||:|||.||:|:..   :||::||||: |..:..|:.:| |.|  :
  Rat   182 TVNRNWYGDADMPASALQEGCKDIATQLVSNMD---INVILGGGRKYMFPAGTPDPEY-PND--V 240

  Fly   276 CESN---DGRNLLKDWRNQKLKESKINRIIFDLIQRRDELESLNSSSFDYLMGVMANGDLSGNSK 337
            .|:.   ||:||:::|    |.:.:.::.:::   |::.::.....|..||||:....|.....:
  Rat   241 NETGTRLDGKNLVQEW----LSKHQGSQYVWN---RQELIQKSLDPSVTYLMGLFEPVDTKFEIQ 298

  Fly   338 A-----PSLKLMVDKSLNVLTKYKQGYLLIVEQFIPSGIDKREQL---------QLLNDTLV--- 385
            .     ||||.|.:.:|:||::..:|:.|.||   ...||:...|         .::.|:.:   
  Rat   299 RDPLMDPSLKDMTEAALHVLSRNPKGFYLFVE---GGRIDRGHHLGTAYLALTEAVMFDSAIERA 360

  Fly   386 -NLHKDQDTLTLVLM-----------------------TNAIYPKPSLDV--------------S 412
             .|..:|||||:|..                       .||:..||...:              .
  Rat   361 SQLTSEQDTLTIVTADHSHVFSFGGYTLRGTSIFGLAPLNALDGKPYTSILYGNGPGYVGTGERP 425

  Fly   413 EETETISLLPEIFNEAESEIQKRLHQMPSESLLFAQGPKSSIFQGVRKETFLAHAIS 469
            ..|:..|..|....:|...::...|. ..:..:||:||::.:..||:::.::||.::
  Rat   426 NVTDAESHDPSYQQQAAVPVKSETHG-GEDVAIFARGPQAHLLHGVQEQNYIAHVMA 481

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Alp13NP_649978.2 ALP_like 127..472 CDD:304875 105/409 (26%)
Akp3NP_073171.2 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166351427
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D216917at33208
OrthoFinder 1 1.000 - - FOG0000192
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.850

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