DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Alp13 and Alp9

DIOPT Version :9

Sequence 1:NP_649978.2 Gene:Alp13 / 41236 FlyBaseID:FBgn0037786 Length:479 Species:Drosophila melanogaster
Sequence 2:NP_001286944.1 Gene:Alp9 / 38633 FlyBaseID:FBgn0035620 Length:517 Species:Drosophila melanogaster


Alignment Length:496 Identity:109/496 - (21%)
Similarity:185/496 - (37%) Gaps:134/496 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    67 SQKIWYDKGIDELNEALR-PQDLTYPKNVRIFVIQGIDGRDWAAFRFPTSDASRGNTNFIWDRFP 130
            :|:.|:......:.|.|. .::....||:.:|:..|:.....||.|   |..........::.||
  Fly    50 TQEFWHSASKKLIREKLEFVRNTKKAKNIILFLGDGMGLATLAAAR---SYIGGEELKLSFEEFP 111

  Fly   131 HLARLKNSCSQQFPCQVASVSRALWLGIPLD------KVPDNQQDCGRLFNATQGPISILRQAQL 189
            .....|.....:.....|..|.:...|:..:      .....:.||..:.|.|....|:.:.|..
  Fly   112 FTGLSKTYSVDKIVPDSACTSTSYLCGVKANYGTIGVNAHVKRGDCAAMANETNHVFSLGKWAMD 176

  Fly   190 AGLRTGFVTTQRIT--GPTGAALGNANGNFE--------CDESMPLNSIKSGCQDIAQQLISDET 244
            ||...|.|||.|:|  .|:|.....|:..:|        |.|      :..|.||||.|||..|.
  Fly   177 AGKAAGLVTTTRVTHASPSGVYAHVADREWENNAVLEEACGE------LSDGLQDIAVQLIHGEV 235

  Fly   245 GKFLNVLIGGGRQMLSSLVPNTKYDPVDEMLCESNDGRNLLKDWR-----NQKLKESKINRIIFD 304
            |..|.|::|||::..        |.|.........|||||::::.     |..:|..|       
  Fly   236 GSKLKVMLGGGKRSF--------YSPEHYDKGRRTDGRNLVEEFEALDAGNTFVKTQK------- 285

  Fly   305 LIQRRDELESLNSSSFDYLMGVMANGDL--------SGNSKAPSLKLMVDKSLNVLTKYKQGYLL 361
                  :|.::|::....|:|:.:...:        ..::..|:|:.|..|::.||...:|||.|
  Fly   286 ------KLLNVNATETGRLLGLFSKSHMHYHLEQLADPDNNEPTLEEMTQKAIEVLETEEQGYFL 344

  Fly   362 IVEQFIPSGIDKREQLQLLNDTLVNLHKDQDT-LTLVL-----MTNAIYPKPSLDV--SEETETI 418
            .||   ...||...     ::|:..:..|:.. |:..:     |||   |:.:|.|  |:.:.|.
  Fly   345 FVE---GGKIDISH-----HETMARIALDETAELSKAVKKAREMTN---PEETLIVVTSDHSHTF 398

  Fly   419 SLL------PEIFNEAE-------------------------SEIQKRLH--------------- 437
            |:.      .:||..|:                         :|..:|:.               
  Fly   399 SVSGYQPRGSDIFGAAKANGKDGKPYLALSYANGKSFQDYYNTETHERVDPTSLPTIGDFDQLFP 463

  Fly   438 -QMPSESL--------LFAQGPKSSIFQGVRKETFLAHAIS 469
             .:|.||.        :||.||.:.:|.||.::..:.|.::
  Fly   464 AMVPLESETHGGEDVGVFASGPWAHLFTGVYEQNTIPHMMA 504

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Alp13NP_649978.2 ALP_like 127..472 CDD:304875 97/435 (22%)
Alp9NP_001286944.1 PRK10518 12..496 CDD:236706 108/486 (22%)
ALP_like 75..508 CDD:304875 105/471 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45466695
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1785
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D216917at33208
OrthoFinder 1 1.000 - - FOG0000192
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11596
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
65.850

Return to query results.
Submit another query.