DRSC/TRiP Functional Genomics Resources

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Protein Alignment nerfin-2 and insm1b

DIOPT Version :9

Sequence 1:NP_001262446.1 Gene:nerfin-2 / 41235 FlyBaseID:FBgn0041105 Length:775 Species:Drosophila melanogaster
Sequence 2:NP_955952.1 Gene:insm1b / 323882 ZFINID:ZDB-GENE-030131-2602 Length:453 Species:Danio rerio


Alignment Length:378 Identity:112/378 - (29%)
Similarity:160/378 - (42%) Gaps:96/378 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   296 DEELHNQAVNGLARLFDRDFPEPDVEVSGL------AELQSNSGKTYTDLSGVATAEIRTTSSDN 354
            |.:...:::|..:.:....||.| ..::.|      |.:....|.:.::.||.|:.         
Zfish    95 DRKYFERSLNLGSPISAESFPTP-ASLTSLDHHLLFAPVDLKIGTSNSNRSGTASG--------- 149

  Fly   355 LPPPPPPPPPPATSTIPATPPLPPPPISRPHKAERRRSKLRKHMAIDEETISPVSGTIIRKLRDD 419
                   ...||..|....|...........|:.::...:||....||.|.|||.|         
Zfish   150 -------AHAPAIQTGAKRPSADAAERKVSSKSAKKPKAIRKLNFEDEVTTSPVLG--------- 198

  Fly   420 EELVVRKGDIDPAFNVVEITEEAKAILASIDNKIGDYMCQLCRTVYDDAFMLAQHRCPRIVHIEY 484
              |.:::|.:|         .:.:......:..:|:::||||:..|.|.|.||||:|.|||.:||
Zfish   199 --LKIKEGPVD---------LKPRPSSGGTNKPLGEFICQLCKEEYSDPFSLAQHKCSRIVRVEY 252

  Fly   485 KCSECEKVFNCPANLASHRRWHKPKAEAA---GVNPAKKRVVETGDLVQEATRSGDDAS------ 540
            :|.||||||:||||||||||||||:.::|   .:.|||....|   |..|.....|..|      
Zfish   253 RCPECEKVFSCPANLASHRRWHKPRVQSAPKQALQPAKPFPEE---LRAEFPSDRDTPSPGLSES 314

  Fly   541 ---DGIYPCHICGKTFRRQAYLKKHQASHQMLDN---------LKNLDFFKSQQQQ--------- 584
               ||:|.|..|||.|:|||||:||...||.|.|         .::.|...|:.:|         
Zfish   315 GSEDGLYDCQHCGKRFKRQAYLRKHILGHQALQNQILGEAFRSAESPDAMPSEDRQSPAPLNLSP 379

  Fly   585 ---LTI--------NGHQLADHVQLQHTTGQA----VTSAAPYASLPRPPPGM 622
               ||.        |...|..|::|.|...||    ...|..|:|     ||:
Zfish   380 ADCLTCPACGEKLPNRASLERHLRLLHDDAQAFPCKFCPATFYSS-----PGL 427

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nerfin-2NP_001262446.1 C2H2 Zn finger 458..481 CDD:275368 14/22 (64%)
C2H2 Zn finger 486..506 CDD:275368 17/19 (89%)
zf-C2H2 544..566 CDD:278523 13/21 (62%)
C2H2 Zn finger 546..566 CDD:275368 12/19 (63%)
insm1bNP_955952.1 SNAG domain. /evidence=ECO:0000250|UniProtKB:Q63ZV0 1..20
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 140..179 8/54 (15%)
C2H2 Zn finger 226..246 CDD:275368 12/19 (63%)
C2H2 Zn finger 254..274 CDD:275368 17/19 (89%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 298..318 3/19 (16%)
zf-C2H2 321..343 CDD:278523 13/21 (62%)
C2H2 Zn finger 323..340 CDD:275368 11/16 (69%)
C2H2 Zn finger 385..404 CDD:275368 3/18 (17%)
C2H2 Zn finger 414..435 CDD:275368 5/19 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 54 1.000 Domainoid score I11215
eggNOG 1 0.900 - - E1_KOG3993
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0002683
OrthoInspector 1 1.000 - - mtm6617
orthoMCL 1 0.900 - - OOG6_109400
Panther 1 1.100 - - O PTHR15065
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3291
SonicParanoid 1 1.000 - - X1791
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
109.800

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