DRSC/TRiP Functional Genomics Resources

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Protein Alignment nerfin-2 and F26F4.8

DIOPT Version :9

Sequence 1:NP_001262446.1 Gene:nerfin-2 / 41235 FlyBaseID:FBgn0041105 Length:775 Species:Drosophila melanogaster
Sequence 2:NP_001379726.1 Gene:F26F4.8 / 184991 WormBaseID:WBGene00005011 Length:302 Species:Caenorhabditis elegans


Alignment Length:165 Identity:39/165 - (23%)
Similarity:62/165 - (37%) Gaps:38/165 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   441 EAKAILASIDNKIGDYMCQLCRTVYDDAFMLAQH--RCPRIVHIE--YKCSECEKVFNCPANLAS 501
            |..|...|.|.|:   .|:.|     |.|..::.  ||...||.:  .:|..|:|:||....|..
 Worm    12 EVNANTTSPDVKV---KCKQC-----DRFFTSERSLRCHIKVHNDKLLECYFCDKMFNRTDTLFF 68

  Fly   502 HRRWHKPKAEAAGVNPAKKRVVETGDLVQEATRSGDDASDGIY--------PCHICGK---TFRR 555
            |...|..|    |..|.:   .|..|.:.|....|::.::..:        .|..|.:   :||:
 Worm    69 HALDHISK----GTLPCR---AEGCDQLVETMLEGENHANTAHHVNGTVSIKCKDCSEVSVSFRK 126

  Fly   556 QAYLKKHQASHQMLDN------LKNLDFFKSQQQQ 584
            ..:  .|...|..|..      :|..||.:.::.|
 Worm   127 MLF--HHTFKHGELKEYAEEMIIKQKDFLRMKKNQ 159

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nerfin-2NP_001262446.1 C2H2 Zn finger 458..481 CDD:275368 6/24 (25%)
C2H2 Zn finger 486..506 CDD:275368 7/19 (37%)
zf-C2H2 544..566 CDD:278523 5/32 (16%)
C2H2 Zn finger 546..566 CDD:275368 5/22 (23%)
F26F4.8NP_001379726.1 C2H2 Zn finger 26..46 CDD:275368 6/24 (25%)
C2H2 Zn finger 53..73 CDD:275368 7/19 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S8156
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.950

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