DRSC/TRiP Functional Genomics Resources

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Protein Alignment Npc2c and AT5G23830

DIOPT Version :10

Sequence 1:NP_649976.1 Gene:Npc2c / 41233 FlyBaseID:FBgn0037783 Length:165 Species:Drosophila melanogaster
Sequence 2:NP_197772.1 Gene:AT5G23830 / 832448 AraportID:AT5G23830 Length:164 Species:Arabidopsis thaliana


Alignment Length:52 Identity:16/52 - (30%)
Similarity:23/52 - (44%) Gaps:5/52 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    82 SLGVTIPYDLEASRGNVCS-NLLHGAYCPLDAGEDVTYQLLLPVTTNQPEVP 132
            ||...|..::||  |:|.. :|....|...|.|  :.|.:.|...|.:.|.|
plant    97 SLACNIDSEIEA--GDVFDFSLKDVLYVGFDEG--IKYSVSLRQKTAEEEDP 144

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Npc2cNP_649976.1 Npc2_like 26..155 CDD:238458 16/52 (31%)
AT5G23830NP_197772.1 PG-PI_TP 28..154 CDD:238459 16/52 (31%)

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