DRSC/TRiP Functional Genomics Resources

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Protein Alignment Npc2c and Npc2

DIOPT Version :10

Sequence 1:NP_649976.1 Gene:Npc2c / 41233 FlyBaseID:FBgn0037783 Length:165 Species:Drosophila melanogaster
Sequence 2:NP_075898.1 Gene:Npc2 / 67963 MGIID:1915213 Length:149 Species:Mus musculus


Alignment Length:143 Identity:38/143 - (26%)
Similarity:62/143 - (43%) Gaps:11/143 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 LVLSIMWTSVADSTPIRQCADSNYPQPLMVQIDDCDALPCDLWKGTEAKIDIQFVATRNTMKKLS 75
            |:|:::..|.|:....:.|. |.......|.:..|...||.|.||....::|.|  |..|..:.|
Mouse     9 LLLALVAASQAEPLHFKDCG-SKVGVIKEVNVSPCPTDPCQLHKGQSYSVNITF--TSGTQSQNS 70

  Fly    76 -AEVHLTSLGVTIPYDLEASRGNVCSNLLHGAYCPLDAGEDVTYQLLLPVTTNQPEVPTRLEVRL 139
             |.||....|:.:|:.:....|  |.:   |..||:...:..:|...|||....|.:...:|.:|
Mouse    71 TALVHGILEGIRVPFPIPEPDG--CKS---GINCPIQKDKVYSYLNKLPVKNEYPSIKLVVEWKL 130

  Fly   140 LDSDDENRVVSCF 152
              .||:...:.|:
Mouse   131 --EDDKKNNLFCW 141

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Npc2cNP_649976.1 Npc2_like 26..155 CDD:238458 34/128 (27%)
Npc2NP_075898.1 Npc2_like 24..145 CDD:238458 34/128 (27%)

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