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Protein Alignment Npc2c and Npc2h
DIOPT Version :9
Sequence 1: | NP_649976.1 |
Gene: | Npc2c / 41233 |
FlyBaseID: | FBgn0037783 |
Length: | 165 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001247376.1 |
Gene: | Npc2h / 43649 |
FlyBaseID: | FBgn0039801 |
Length: | 157 |
Species: | Drosophila melanogaster |
Alignment Length: | 180 |
Identity: | 40/180 - (22%) |
Similarity: | 62/180 - (34%) |
Gaps: | 50/180 - (27%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MSSFKKLSLCLVLSIMWTSVADSTPIRQCADSNYPQPLMVQIDDCD-----ALPCDLWKGTEAKI 60
:||...::..||||.:...:.: .:.|.|| :|.|. ..|| .||..
Fly 4 LSSLLPVAFALVLSSVSAEIVN---FQTCEDS---------VDSCSISQVRVTPC-----PEANA 51
Fly 61 DI--------QFVATRNTMKKLSAEVHLTSLG------VTIP---YDLEASRGNVCSNLLHGAYC 108
:. :|..:.:......|:..:.||| |.:| .|.||.:... |
Fly 52 NAACHIRRRHRFTMSFDFTPHFDADTLVASLGWAKSENVELPLLTMDQEACKYTT---------C 107
Fly 109 PLDAGEDVTYQLLLPVTTNQPEVPTRLEVRLLDSDDENRVVSCFLADTRV 158
|:.:|...||...:|.....|..|..:...|.|...:.| .||..|.:|
Fly 108 PVRSGVTQTYTNNMPADARFPLSPYTIRWALKDPVSQKR--CCFTIDIKV 155
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
1 |
0.930 |
- |
- |
|
C45451268 |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
1 |
1.100 |
- |
- |
P |
PTHR11306 |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
|
3 | 2.940 |
|
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