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Protein Alignment Npc2c and Npc2f
DIOPT Version :9
Sequence 1: | NP_649976.1 |
Gene: | Npc2c / 41233 |
FlyBaseID: | FBgn0037783 |
Length: | 165 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_651219.1 |
Gene: | Npc2f / 42864 |
FlyBaseID: | FBgn0039154 |
Length: | 170 |
Species: | Drosophila melanogaster |
Alignment Length: | 135 |
Identity: | 29/135 - (21%) |
Similarity: | 48/135 - (35%) |
Gaps: | 20/135 - (14%) |
- Green bases have known domain annotations that are detailed below.
Fly 23 STPIRQCADSNYPQPLMVQIDDCDALPCDLWKGTEAKIDIQFVATRNTMKKLSAEV-----HLTS 82
|.|...|. |.| |...:.|:.|..|||.:.:....|:.::|....|.:..|..|| ::.:
Fly 43 SLPFEDCG-SLY-QVSYLDIESCTTLPCSMARNATIKVTVRFDDNGNGVSFLKHEVRWVFNYIKT 105
Fly 83 LGVTIPYDLEASRGNVCSNLLHGAYCPLDAGEDVTYQLLLPVTTNQPEVPTRLEVRLLDSDDENR 147
.....|...:...| |...|.....|...:.|....|.:...:.....|::|:|.
Fly 106 QAAITPDPCDGDHG-----------CIESASGGKAYWANIFVNETLPVMKGSMLWESKDANDQNL 159
Fly 148 VVSCF 152
: ||
Fly 160 I--CF 162
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1612792at2759 |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
1 |
1.100 |
- |
- |
P |
PTHR11306 |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
|
3 | 3.020 |
|
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