DRSC/TRiP Functional Genomics Resources

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Protein Alignment Npc2c and Npc2f

DIOPT Version :10

Sequence 1:NP_649976.1 Gene:Npc2c / 41233 FlyBaseID:FBgn0037783 Length:165 Species:Drosophila melanogaster
Sequence 2:NP_651219.1 Gene:Npc2f / 42864 FlyBaseID:FBgn0039154 Length:170 Species:Drosophila melanogaster


Alignment Length:135 Identity:29/135 - (21%)
Similarity:48/135 - (35%) Gaps:20/135 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 STPIRQCADSNYPQPLMVQIDDCDALPCDLWKGTEAKIDIQFVATRNTMKKLSAEV-----HLTS 82
            |.|...|. |.| |...:.|:.|..|||.:.:....|:.::|....|.:..|..||     ::.:
  Fly    43 SLPFEDCG-SLY-QVSYLDIESCTTLPCSMARNATIKVTVRFDDNGNGVSFLKHEVRWVFNYIKT 105

  Fly    83 LGVTIPYDLEASRGNVCSNLLHGAYCPLDAGEDVTYQLLLPVTTNQPEVPTRLEVRLLDSDDENR 147
            .....|...:...|           |...|.....|...:.|....|.:...:.....|::|:|.
  Fly   106 QAAITPDPCDGDHG-----------CIESASGGKAYWANIFVNETLPVMKGSMLWESKDANDQNL 159

  Fly   148 VVSCF 152
            :  ||
  Fly   160 I--CF 162

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Npc2cNP_649976.1 Npc2_like 26..155 CDD:238458 27/132 (20%)
Npc2fNP_651219.1 Npc2_like 46..166 CDD:238458 27/132 (20%)

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