DRSC/TRiP Functional Genomics Resources

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Protein Alignment Npc2c and Npc2a

DIOPT Version :10

Sequence 1:NP_649976.1 Gene:Npc2c / 41233 FlyBaseID:FBgn0037783 Length:165 Species:Drosophila melanogaster
Sequence 2:NP_608637.1 Gene:Npc2a / 33374 FlyBaseID:FBgn0031381 Length:148 Species:Drosophila melanogaster


Alignment Length:106 Identity:31/106 - (29%)
Similarity:45/106 - (42%) Gaps:7/106 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 VQIDDCDA--LPCDLWKGTEAKIDIQFVATRNTMKKLSAEVHLTSLGVTIPYDLEASRGNVCSNL 102
            |.|:.||.  ..|.|.:.|.....|.| |.......:...||...||:.:|:.|  :..:.|.: 
  Fly    34 VAIEGCDTTKAECILKRNTTVSFSIDF-ALAEEATAVKTVVHGKVLGIEMPFPL--ANPDACVD- 94

  Fly   103 LHGAYCPLDAGEDVTYQLLLPVTTNQPEVPTRLEVRLLDSD 143
             .|..|||:..|...|...|||..:.|:|...::..|.|.|
  Fly    95 -SGLKCPLEKDESYRYTATLPVLRSYPKVSVLVKWELQDQD 134

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Npc2cNP_649976.1 Npc2_like 26..155 CDD:238458 31/106 (29%)
Npc2aNP_608637.1 Npc2_like 21..145 CDD:238458 31/106 (29%)

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