DRSC/TRiP Functional Genomics Resources

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Protein Alignment Npc2c and heh-1

DIOPT Version :9

Sequence 1:NP_649976.1 Gene:Npc2c / 41233 FlyBaseID:FBgn0037783 Length:165 Species:Drosophila melanogaster
Sequence 2:NP_001379800.1 Gene:heh-1 / 175426 WormBaseID:WBGene00006452 Length:154 Species:Caenorhabditis elegans


Alignment Length:158 Identity:39/158 - (24%)
Similarity:70/158 - (44%) Gaps:20/158 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 LVLSIMWTSVADSTPI--RQC-ADSNYPQPLMVQIDDCDAL------PCDLWKGTEAKIDIQFVA 66
            :.|:::..:.|:...|  :.| :|....|   |:.|.|:..      .|...||:...|.|.|..
 Worm     5 IFLALLGLAAAEFIEIGYKVCKSDGTVSQ---VKADGCELTVKDGKKVCLFKKGSRPIIQIAFKP 66

  Fly    67 TRNTMKKLSAEVHLTSLGVTIPYDLEASRGNVCSNLLHGAYCPLDAGEDVTYQLLLPVTTNQP-- 129
            :::| .||...|. ..:|.:...|...:..:.|:   :|..||:.|||:..::..:.:|.|.|  
 Worm    67 SKDT-DKLKTSVR-AKVGGSAMVDFPQTNSDACT---YGVKCPVSAGENQIFEQSISITENHPAG 126

  Fly   130 EVPTRLEVRLLDSDDENRVVSCFLADTR 157
            || .::..:|...|....|...|||:.:
 Worm   127 EV-IQVNWQLTRPDSGKEVCIIFLAEIK 153

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Npc2cNP_649976.1 Npc2_like 26..155 CDD:238458 36/139 (26%)
heh-1NP_001379800.1 Npc2_like 22..150 CDD:238458 34/136 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4063
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1612792at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11306
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.920

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