DRSC/TRiP Functional Genomics Resources

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Protein Alignment Npc2d and AT3G44100

DIOPT Version :9

Sequence 1:NP_649975.1 Gene:Npc2d / 41232 FlyBaseID:FBgn0037782 Length:173 Species:Drosophila melanogaster
Sequence 2:NP_189996.1 Gene:AT3G44100 / 823530 AraportID:AT3G44100 Length:152 Species:Arabidopsis thaliana


Alignment Length:164 Identity:38/164 - (23%)
Similarity:67/164 - (40%) Gaps:33/164 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 VLVLISLGLLLSLAEAQQEHPATSVKKCSGSKPFPLEVRVHNCVTPPCQIVKGTTQKFEIDFAVD 69
            :|:|:|:..|.:|      | |||...|. .:..|  |:|......|..:|.|....|:|..:..
plant    10 LLLLLSVFFLPAL------H-ATSFTYCD-KRLDP--VKVTGVKISPDPVVSGAAATFKIFGSTG 64

  Fly    70 KYITQLTTLVKATTLGI--ITVPYELPADVAAVCPNLQYGAYCPLYPTEDV-SYLFTFPI----G 127
            :.|:....:::...:||  .|..::|..:.|           ||:.|...| |:..|.|.    |
plant    65 EDISGGKVVIRVLYVGIPVHTETHDLCDETA-----------CPVAPGSFVLSHSQTLPSITPPG 118

  Fly   128 EYPEIGVKIEIYLVDQDNEIATCFVCDIKVVKGN 161
            .|     .:::.:.|::....||.....|:..|:
plant   119 TY-----TLKMTINDKNGGRLTCISFKFKITVGS 147

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Npc2dNP_649975.1 Npc2_like 29..155 CDD:238458 27/132 (20%)
AT3G44100NP_189996.1 PG-PI_TP 27..141 CDD:238459 27/132 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11306
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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