DRSC/TRiP Functional Genomics Resources

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Protein Alignment Npc2d and Npc2f

DIOPT Version :10

Sequence 1:NP_649975.1 Gene:Npc2d / 41232 FlyBaseID:FBgn0037782 Length:173 Species:Drosophila melanogaster
Sequence 2:NP_651219.1 Gene:Npc2f / 42864 FlyBaseID:FBgn0039154 Length:170 Species:Drosophila melanogaster


Alignment Length:74 Identity:16/74 - (21%)
Similarity:29/74 - (39%) Gaps:11/74 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 VKVLVLISLGLLLSLAEAQQEHPATSVKKCSGSKPFPLE----------VRVHNCVTPPCQIVKG 57
            :|:|::|.....|:....:....|. .||....:..|.|          :.:.:|.|.||.:.:.
  Fly    10 LKILLVICAAHELAGGTIKSTRDAV-YKKYLSLRSLPFEDCGSLYQVSYLDIESCTTLPCSMARN 73

  Fly    58 TTQKFEIDF 66
            .|.|..:.|
  Fly    74 ATIKVTVRF 82

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Npc2dNP_649975.1 Npc2_like 29..155 CDD:238458 11/48 (23%)
Npc2fNP_651219.1 Npc2_like 46..166 CDD:238458 8/37 (22%)

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