DRSC/TRiP Functional Genomics Resources

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Protein Alignment Npc2d and NPC2

DIOPT Version :9

Sequence 1:NP_649975.1 Gene:Npc2d / 41232 FlyBaseID:FBgn0037782 Length:173 Species:Drosophila melanogaster
Sequence 2:NP_001350617.1 Gene:NPC2 / 10577 HGNCID:14537 Length:174 Species:Homo sapiens


Alignment Length:156 Identity:44/156 - (28%)
Similarity:68/156 - (43%) Gaps:8/156 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 LLLSLAEAQQEHPATSVKKCSGSKPFPLEVRVHNCVTPPCQIVKGTTQKFEIDFAVDKYITQLTT 77
            |||:|:.|.|..| ...|.|........||.|..|.|.|||:.||.:....:.|..:........
Human     9 LLLALSTAAQAEP-VQFKDCGSVDGVIKEVNVSPCPTQPCQLSKGQSYSVNVTFTSNIQSKSSKA 72

  Fly    78 LVKATTLGIITVPYELPADVAAVCPNLQYGAYCPLYPTEDVSYLFTFPI-GEYPEIGVKIEIYLV 141
            :|....:| :.||:.:|..     ...:.|..||:...:..|||...|: .|||.|.:.:|..|.
Human    73 VVHGILMG-VPVPFPIPEP-----DGCKSGINCPIQKDKTYSYLNKLPVKSEYPSIKLVVEWQLQ 131

  Fly   142 DQDNEIATCFVCDIKVVKGNGGNTVY 167
            |..|:...|:...:::|..:||...:
Human   132 DDKNQSLFCWEIPVQIVSLSGGERAW 157

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Npc2dNP_649975.1 Npc2_like 29..155 CDD:238458 34/126 (27%)
NPC2NP_001350617.1 Npc2_like 24..145 CDD:238458 34/126 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4063
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1612792at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11306
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
65.880

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