DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fancl and AT5G65740

DIOPT Version :10

Sequence 1:NP_649974.1 Gene:Fancl / 41231 FlyBaseID:FBgn0037781 Length:381 Species:Drosophila melanogaster
Sequence 2:NP_001032152.1 Gene:AT5G65740 / 836703 AraportID:AT5G65740 Length:300 Species:Arabidopsis thaliana


Alignment Length:305 Identity:71/305 - (23%)
Similarity:123/305 - (40%) Gaps:62/305 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   101 VPKELCREGNIYYDILALYKSNEYCLQVDEACSMIRF-------SEFTDFEQHYLELK-----IP 153
            |.:|.|.|         |.||:.:..:|......|.:       .:.|.|..|.|:.|     :.
plant     9 VGRERCEE---------LAKSSSFYRKVYSEIEEIGWEPIRRLGGDLTFFSFHILDKKGRAHNLE 64

  Fly   154 SLLLLDH-SLPDCVS--LGEMLT---KSAGNLEEALNLFRKLLEDLRPFYDNFMDIDE-LCHVLQ 211
            ..|..|: :.|..||  :..|.|   .::..|::.::.|:|.|:.|:.|:....:||: ||.|..
plant    65 IQLNRDYPNSPPSVSADVPYMFTLEWSTSSRLKDVMHQFQKHLDYLQEFWSVLDNIDKSLCVVDV 129

  Fly   212 PSPISSKHKTRLFPLKDRVYL-KLTIADPFACIASMSLKIIGPTEEVARLR--HVL-SDGLSNWD 272
            ..|..:....|:....|.:.: .:...||.:...|   :.|||......:.  |:| ......|.
plant   130 KQPARASAIRRIDAGNDCIIIVHIDFKDPKSLPES---RFIGPVPSATHMNNLHMLWRRNCKRWS 191

  Fly   273 SEMNIHKNLLRMFDLCYFPMPDWSDGPKLD-------EEDNEELRCNICFAYRLD--------GG 322
            :|.:..:||     .|..       |.:|.       |:|.:::.|.||:|..|.        .|
plant   192 NERSFPENL-----ECIL-------GTELPKPLGLQVEDDQQQVECGICYAQFLPTDEELGARSG 244

  Fly   323 EVPLVSCDNAKCVLKCHAVCLEEWFKTLMDGKTFLEVSFGQCPFC 367
            .....:|:|..|....|::||.:|.:::...:...:|.||.||:|
plant   245 TRTDYTCENISCNKSFHSLCLTDWLRSITTTRQSFDVLFGNCPYC 289

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FanclNP_649974.1 FANCL_d1 8..95 CDD:462888
DRWD-N_DmFANCL 108..186 CDD:467643 19/95 (20%)
DRWD-C_DmFANCL 194..292 CDD:467647 22/102 (22%)
FANCL_C 307..376 CDD:463350 19/69 (28%)
AT5G65740NP_001032152.1 DRWD-N_FANCL 29..103 CDD:467665 14/73 (19%)
DRWD-C_FANCL 113..204 CDD:467666 22/98 (22%)
FANCL_C 221..298 CDD:463350 19/69 (28%)
Blue background indicates that the domain is not in the aligned region.

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