DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fancl and Fancl

DIOPT Version :9

Sequence 1:NP_649974.1 Gene:Fancl / 41231 FlyBaseID:FBgn0037781 Length:381 Species:Drosophila melanogaster
Sequence 2:NP_080199.1 Gene:Fancl / 67030 MGIID:1914280 Length:375 Species:Mus musculus


Alignment Length:396 Identity:94/396 - (23%)
Similarity:155/396 - (39%) Gaps:58/396 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 EDVERLLCQKYPGLAAELQPSGACIIRGVLGSEDTWRRLKLYLPHHPALHGFQLYVQESL----- 64
            ::.|..|.:.:|.|..  |.....:..|.:.::.:...|::.||....|...:|.....|     
Mouse     2 DEAEASLLRHFPLLLP--QNREKTVYEGFISAQGSDFHLRIVLPKDLQLKKARLLCSLQLKNILN 64

  Fly    65 EYKLYTSANLKLQDDWLLEDFLDHLPKILPAQKAPTVPKELCRE--------------GNIYYDI 115
            ||.......:|...|  |..|:..|..||  :.|....:|||.:              |.|.:|.
Mouse    65 EYHQVVQQRMKHSPD--LMSFMMELKMIL--EVALKNKQELCVQPPSCSFCKDLLTEIGAIGWDK 125

  Fly   116 LALYKS--NEYCLQVDEACSMIRFSEFTDFEQHYLELKI-------PSLLLLDHSLPDCVSLGEM 171
            ||..:|  :...|:.|:|..          .:|.:.:|:       |...::|..:|..||    
Mouse   126 LACVESSFSTIKLKADDASG----------RKHLITVKLKAKYPVEPPDCVVDFPVPFSVS---- 176

  Fly   172 LTKSAGNLEEALNLFRKLLEDLRPFYDNFMDIDELCHVLQPSPISSKHKTRLFPLKDRVYLKLTI 236
             .....:|.:..:.|...||.|:.|:|...:|||...||:|.........|...|...|.:.:.:
Mouse   177 -WTPQSSLVDVYSQFLVALETLKVFWDVMDEIDEKTWVLEPEKPPRSATARRIALGKNVSIAIEV 240

  Fly   237 ADPFACIASMSLKIIGPTEEVARLRHVLSDGLSNWDSEMNIHKNLLRMFDLCYFPMPDWSDGPKL 301
             ||...........:|.......|...||..:..||.|.::.:||..:.:: .||      ...:
Mouse   241 -DPRHPTMLPEFCFLGADHVTKPLGMKLSGSIHLWDPENSLLQNLKDVLEI-DFP------ARSI 297

  Fly   302 DEEDNEELRCNICFAYRLDGGEVPLVSCDNAKCVLKCHAVCLEEWFKTLMDGKTFLEVSFGQCPF 366
            .||.:..:.|.||:|..|:|. :|...|:|.:|....|.:||.||.:.|...:....|.||.||:
Mouse   298 LEESDFSMDCGICYARHLNGA-IPDQVCNNPQCGQPFHEICLYEWLRGLSTSRQSFNVFFGDCPY 361

  Fly   367 CKAKLS 372
            |...::
Mouse   362 CSKPIT 367

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FanclNP_649974.1 WD-3 20..293 CDD:286806 66/300 (22%)
FANCL_C 307..376 CDD:288626 22/66 (33%)
FanclNP_080199.1 WD-3 15..295 CDD:286806 67/307 (22%)
UBC-RWD region (URD). /evidence=ECO:0000250 104..294 45/212 (21%)
FANCL_C 303..371 CDD:288626 22/67 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167842823
Domainoid 1 1.000 53 1.000 Domainoid score I11337
eggNOG 1 0.900 - - E1_KOG3268
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0007502
OrthoInspector 1 1.000 - - oto94695
orthoMCL 1 0.900 - - OOG6_105411
Panther 1 1.100 - - LDO PTHR13206
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5262
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1110.730

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