DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ohgt and crbn

DIOPT Version :10

Sequence 1:NP_649973.1 Gene:ohgt / 41230 FlyBaseID:FBgn0037780 Length:585 Species:Drosophila melanogaster
Sequence 2:NP_001008192.1 Gene:crbn / 493554 XenbaseID:XB-GENE-973907 Length:447 Species:Xenopus tropicalis


Alignment Length:493 Identity:136/493 - (27%)
Similarity:215/493 - (43%) Gaps:104/493 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   127 MVSQARNRDGGIAALLSGDNFLQRVRSMVFSQERRRSRTSEETSQEAAEQPVDPPPQQPPRPPID 191
            |.......|.||..:   .|.||     |.|.|          |:|..|..::.........|..
 Frog     1 MADDEGEEDPGINNM---GNLLQ-----VISSE----------SEEEDEMELEDAKTADSESPNI 47

  Fly   192 IGFDTNLPAEHSYFGNHLSRVPGVDYLEVGSVHHMLIFLH-QHILFPGEVLPF---------MID 246
            |.|||:||..|:|.|..:....|....:..|...:.:..| |.:|.||:.||.         |:.
 Frog    48 INFDTSLPTSHAYLGVDMEEFHGRTLHDDDSCQQIPVLPHVQVMLIPGQTLPLHLSRPQEVSMVR 112

  Fly   247 GRMFDED-----MPGLDGLIFGVSFPRLQPPEDNPHKLYGVTCQIY---ERGESGRGLVFYKSRA 303
            | :...|     :...|||            :...|  :|.|.:||   |..|.|...|..|:..
 Frog   113 G-LIQRDRTFAVLAYSDGL------------QREAH--FGTTAEIYAYREEHEFGIETVKVKAIG 162

  Fly   304 LQRIVI-----NCDDIKGSPQYIARNPTSKCFSKVKILPEYFLPEPLQTVDMGSMARFRDIPSMR 363
            .||..:     ..|.|:     :||         |:||||..||.|:.::.:.|.:|....|:.:
 Frog   163 RQRFQVLETRTQADGIQ-----VAR---------VQILPERVLPCPMTSLQLDSQSRHLLFPTNK 213

  Fly   364 --------------DKYRRFQL---STTTWPSDACQEYSFSSIVERARQRL----ESQKIDTMPK 407
                          .||||.:.   |.|:|||.....|...|::||.:.:|    |:.:.|::|.
 Frog   214 PVSGRSPQSKCQWLHKYRRRKFLGASLTSWPSWLYALYDADSLMERVKLQLHEWDENLRDDSLPA 278

  Fly   408 CPIQLSFWLVRNLHLTEKM-MRLTFLTDSVNTRLQLIKSTFKDETLFFCRYC-NSSLALCSDLFA 470
            .||..|:.:...|.:.:.: ::|..:.:::. ||:.........|...|::| ::.:...:::|:
 Frog   279 NPIDFSYRVAACLPIDDALRIQLLQIGNAIQ-RLRCELDIMSKCTSLCCKHCPDTEITTKNEIFS 342

  Fly   471 MSKHGVQTQYCNPEGYIHETNTVYRVISHAIGYSGEPSTKFSWFPGYQWHIILCKFCAQHVGWEF 535
            :|..|....|.||.||:|||.|||:..:  :...|.|||:.|||||:.|.|..|:.|..|:||:|
 Frog   343 LSLCGPMAAYVNPHGYVHETLTVYKAFN--LSLVGRPSTENSWFPGFAWTIAQCRVCGSHMGWKF 405

  Fly   536 KAVHPNLTPKVFFGLAGSSV--RIGKASE------YSP 565
            .||..:|:|:.|:||..|::  ||.:..|      :||
 Frog   406 TAVRKDLSPQKFWGLTRSALQPRIPEPDEGEMGHDHSP 443

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ohgtNP_649973.1 PHA02664 <35..109 CDD:177447
CRBN_C_like 453..555 CDD:276940 41/102 (40%)
crbnNP_001008192.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..47 14/63 (22%)
LON_substr_bdg 82..320 CDD:426647 64/267 (24%)
CRBN_C_like 324..425 CDD:276940 41/102 (40%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.