DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment MAN2C1 and LManII

DIOPT Version :9

Sequence 1:NP_001243423.1 Gene:MAN2C1 / 4123 HGNCID:6827 Length:1057 Species:Homo sapiens
Sequence 2:NP_609408.1 Gene:LManII / 34437 FlyBaseID:FBgn0027611 Length:1080 Species:Drosophila melanogaster


Alignment Length:1068 Identity:196/1068 - (18%)
Similarity:347/1068 - (32%) Gaps:312/1068 - (29%)


- Green bases have known domain annotations that are detailed below.


Human   204 KDNQRSFQALYTANQMVNVCDPAQPETFPVAQALASRFFGQHGGESQHTIHATGHCHIDTAWL-- 266
            |.:|..:|:          |.|.:|...                    .:|...|.|.|..||  
  Fly    30 KASQCGYQS----------CHPTKPNML--------------------NVHLVAHTHDDVGWLKT 64

Human   267 -----WPFKETVRKCARSWV--TALQLMERNPE--FIFACSQAQQLEWVKSRYPGLYSRIQEFAC 322
                 :..:..::|....::  :.::.:.|:||  ||:. ..|...:|.|.:.|.:...::....
  Fly    65 VDQYYYGSETKIQKAGVQYIIDSVVEALLRDPEKRFIYV-ESAFFFKWWKEQKPKVQEAVKMLVE 128

Human   323 RGQFVPVGGTWVEMDGNLPSGEAMVRQFLQGQNFFLQEFGKMCSE---FWLPDTFGYSAQLPQIM 384
            :|:...:||.|...|......::::.||..|.......||: |..   .|..|.||:|.::..:.
  Fly   129 QGRLEFIGGAWSMNDEATTHYQSVIDQFSWGLRLLNDTFGE-CGRPRVGWQIDPFGHSREMASMF 192

Human   385 HGCGI--------------RRFLTQ--KLSWNLVNSFPHHTFFWEG------------------- 414
            ...|.              .|.:|:  ::.|:...:.......:.|                   
  Fly   193 AQMGFDGMFFGRLDYQDKDERLMTKNAEMIWHGSANLGEEADLFSGALYNNYQAPDGFCFDILCN 257

Human   415 ----LDGSRVLVHFPPGDSYGMQGSVEEVLKTVANNRDKGRANHSAFLFGFGDGGGGPTQTM--- 472
                :||.    |.|..:   ::..::..|..........|.|:.....| ||......|..   
  Fly   258 DAPIIDGK----HSPDNN---VKERIDTFLDFAKTQSQYYRTNNIIVTMG-GDFTYQAAQVYYKN 314

Human   473 LDRLKRLSN---TDGLPRVQLSSPRQLFSA----LESDSEQLCTW---VGELF---LELH---NG 521
            ||:|.|..|   .:|      |:...|:|.    |:|..:...||   ..:.|   .:.|   .|
  Fly   315 LDKLIRYGNERQANG------SNINLLYSTPSCYLKSLHDAGITWPTKSDDFFPYASDPHAYWTG 373

Human   522 TYTTHAQIKKGNRECERILHDVELLSSLALARSAQFLYPAAQLQHLWRLLLLNQFHDVVTGSCIQ 586
            .:|:...:|:..|:....|...:.||:||..:..:|   ...|..:...|.:.|.||.:||:..:
  Fly   374 YFTSRPTLKRFERDGNHFLQVCKQLSALAPKKPEEF---DPHLTFMRETLGIMQHHDAITGTEKE 435

Human   587 MVAEE---------AMC--------HYEDIRSHGNTLLSAAAAAL----CA-----GEPGPE--- 622
            .||.:         ..|        :...::|..|...::|....    ||     ..|..|   
  Fly   436 KVALDYAKRMSVAFRACGATTRNALNQLTVQSKDNVKDTSAKYVFEFKTCALLNITSCPVSEAND 500

Human   623 --GLLIVNTLPWKRIEVMALPKPGGAHSL----GLT--------PSPGDSAQHGLCSCSSPHLTA 673
              .|.:.|.|.....|.:.:|.|...:.:    |:|        |......:|...:.....:..
  Fly   501 RFALTLYNPLAHTVNEYVRIPVPYSNYRIIDNKGVTLESQAVPIPQVLIDIKHRNSTAKYEIVFL 565

Human   674 APAAPAACVRS------ARAPTDSASRPPPTKTDGSVTLDNGIIRVKLDPTGRLT-----SLVLV 727
            |...||...|:      .....::.|:..|.:|.....:.|..|::..|..|.|:     .|..:
  Fly   566 ATNIPALGYRTYYVEKLDSTEGNTRSKALPKRTSSVTVIGNSHIQLGFDTNGFLSEVTADGLTRL 630

Human   728 ASGREAIAEGAVGN--QFV-------LF-----------DDVPLYWDAWD-VMDYHLETRKPVLG 771
            .|......||||||  :|:       :|           |.|.:.....| |.:.|.:....:  
  Fly   631 VSQEFLFYEGAVGNNAEFLNRSSGAYIFRPNENKIHFATDQVEIEVYKGDLVHEVHQKFNDWI-- 693

Human   772 QAGTLAVGTEGGLRGSAWFLLQISPNSRLSQEVVL----DVGCPYVRFHTEVHWHEAHKFLKVEF 832
             :..:.|..:.......|.:..|..:..:.:||:.    |:....: |.|:.:..|..|      
  Fly   694 -SQVVRVYNKDSYAEFEWLVGPIPIDDGIGKEVITRFNSDIASDGI-FRTDSNGREMIK------ 750

Human   833 PARVRSSQATYEIQFGHLQRPTHY------NTSWDWAR------------------FEVWAHRWM 873
              |..:.:.|:.::........:|      :...|.||                  .|:..||.:
  Fly   751 --RKINHRDTWSVKINEAVAGNYYPITTKIDVEDDTARMAILTDRAQGGSSLKDGSLELMVHRRL 813

Human   874 DLSEHGFGLA-LLNDCKYGASVRGSILSLSLLRAPKAPDATADTGRHEFTYA------------- 924
             |.:..||:. .||:.:||                   |.....|:|...:.             
  Fly   814 -LKDDAFGVGEALNETEYG-------------------DGLIARGKHHLFFGKSTDREGVSLKGI 858

Human   925 --------LMPHKGSFQD-----AGVIQAAYSLNFPLLALPAPSPAPATSWSAFSVSSPAVVLET 976
                    |:|....|.:     |...|.|::..|..::|..|.|....:...:..:...|..|.
  Fly   859 ERLTQLEKLLPTWKFFSNMEDYSADEWQTAFTNIFSGISLVLPKPVHLLTLEPWHENQLLVRFEH 923

Human   977 VKQ-----AESSPQRRSL--VLRLYEAHGSHV-----DCWLHLSLPVQEAILCDLLERPDP--AG 1027
            :.:     :.|.|.:.::  ||..::..|...     :.||..|..:|.|        |||  |.
  Fly   924 IMENGEDASYSQPVQFNVKNVLSAFDVEGIRETTLDGNAWLDESRRLQFA--------PDPEEAA 980

Human  1028 HLTLRDNRLKLTFS-PFQVLSLLLVLQP 1054
            ..|.      .||| |.:.:.||...:|
  Fly   981 FNTY------ATFSQPAESVHLLSAEKP 1002

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MAN2C1NP_001243423.1 AMS1 68..1026 CDD:223460 187/1037 (18%)
GH38N_AMII_Man2C1 252..503 CDD:212124 58/313 (19%)
Alpha-mann_mid 517..596 CDD:286360 21/98 (21%)
Glyco_hydro_38C 700..1043 CDD:285047 80/438 (18%)
LManIINP_609408.1 GH38N_AMII_LAM_like 47..323 CDD:212121 52/305 (17%)
Alpha-mann_mid 370..445 CDD:214875 19/77 (25%)
Glyco_hydro_38C 502..957 CDD:285047 83/486 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3970
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
11.030

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