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Protein Alignment mtTFB2 and Tfb2m

DIOPT Version :9

Sequence 1:	NP_649971.1	Gene:	mtTFB2 / 41228	FlyBaseID:	FBgn0037778	Length:	452	Species:	Drosophila melanogaster
Sequence 2:	NP_001008294.1	Gene:	Tfb2m / 289307	RGDID:	1307091	Length:	397	Species:	Rattus norvegicus

Alignment Length:	353	Identity:	79/353 - (22%)
Similarity:	141/353 - (39%)	Gaps:	76/353 - (21%)

- Green bases have known domain annotations that are detailed below.

  Fly    28 DFPE--KLLNRKQKVPTHMYIANSEAAARINQYLEPHFQSSGCDTVMELNSGAGYFTRHLLDRES 90
            ||.|  ...::.:..||. :||..::|..:.:.|..| |:.....::|.|.|.|..|..||...:
  Rat    56 DFEESSSWTHKSRSEPTR-HIACKKSARNLVRDLLEH-QNPSHQLILECNPGPGILTGALLKAGA 118

  Fly    91 QFRRIILLESMDHFMPKIQELHTLYPERVKVRQGDFVNL----WKLVYMDK------MDGGSRVA 145
               |::..||...|:|.::.|.......::|...||..:    .:||..|.      .:.|.:..
  Rat   119 ---RVVAFESEKMFIPHLESLRKNADGELQVVHCDFFKIDPRYQELVRPDVNSHTIFQNLGIKAV 180

  Fly   146 DLLSDVPQKAFTDDINMLVFGAVGSYPFFKH---LINSLIFQ----TSLFNLGRCEM-------- 195
            ...:.||.|         |||.:.:    ||   |:..::|.    .|::..||.|:
  Rat   181 PWSAGVPIK---------VFGILPN----KHERRLLWKILFDLYSCESIYRYGRVELNMFISEKE 232

  Fly   196 ---ILAMP--PPIYIHLTCNNEIGYLIYRSTSVLFQILFEHKFIAKVPREDFLPQQMAYSPTKSS 255
               ::|.|  |.              :|:...||:|:..|.||:...|...| .........:.|
  Rat   233 FRKLIATPKRPD--------------LYQVLGVLWQVACEIKFLHMEPWSSF-SVHAENGHLEKS 282

  Fly   256 KLGKVQSINPEYLYLVKFTPRRNLHELCQSQDLPAL----WFFIKQNYVSRRNRIIPNLEKWVPG 316
            |..:..::..:.||||:.||||.|.    :::|..|    :|.:.::...:||..|.:..:.:..
  Rat   283 KHSESLNLLKQNLYLVRMTPRRTLF----TENLSPLNYDMFFHLVKHCFGKRNAPIIHHLRSLST 343

  Fly   317 CGPRLI---INPKSSESVTPIYPDELPK 341
            ..|..|   |..:..::...:||.:..:
  Rat   344 VDPINILRQIRKRPGDTAAKMYPHDFKR 371

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.