DRSC/TRiP Functional Genomics Resources

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Protein Alignment mtTFB2 and tfbm-1

DIOPT Version :9

Sequence 1:NP_649971.1 Gene:mtTFB2 / 41228 FlyBaseID:FBgn0037778 Length:452 Species:Drosophila melanogaster
Sequence 2:NP_491242.2 Gene:tfbm-1 / 188022 WormBaseID:WBGene00020189 Length:367 Species:Caenorhabditis elegans


Alignment Length:454 Identity:92/454 - (20%)
Similarity:154/454 - (33%) Gaps:158/454 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 DFPEKLLNRKQKVPTHMYIANSEAAARINQYLEPHFQSSGCDTVMELNSGAGYFTRHLLDRESQF 92
            ||......|.:|:.:..|:.:    ..|.:.:..|.:....|.|:|:..|.|..||.:|  |:..
 Worm    15 DFIHMYRLRAKKILSQNYLMD----MNITRKIAKHAKVIEKDWVIEIGPGPGGITRAIL--EAGA 73

  Fly    93 RRIILLESMDHFMPKIQELHTLYPERVKVRQGDFV-----NLWKLVYMDKMDGGSRVADLLSDVP 152
            .|:.::|..:.|:|.:|.|......|:.:...|.:     ::||          :..|.     |
 Worm    74 SRLDVVEIDNRFIPPLQHLAEAADSRMFIHHQDALRTEIGDIWK----------NETAR-----P 123

  Fly   153 QKAFTDDINMLVFGAVGSYPF-------FKHLINSLIFQTSLFNLGRCEMILAMPPPIYIHL--- 207
            :.....|.|:.....:|:.||       .|:| ..:.::..::..||..:.|.....:...|   
 Worm   124 ESVDWHDSNLPAMHVIGNLPFNIASPLIIKYL-RDMSYRRGVWQYGRVPLTLTFQLEVAKRLCSP 187

  Fly   208 -TCNNEIGYLIYRS-TSVLFQILFEHKFIAKVPREDFLPQQMAYSPTKSSKLGKVQSINPEY-LY 269
             .|:.       || .|::.|.:.|.|.:.::....|:|:                   |:. :.
 Worm   188 IACDT-------RSRISIMSQYVAEPKMVFQISGSCFVPR-------------------PQVDVG 226

  Fly   270 LVKFTPRRN---------LHELCQSQDLPALWFFIKQNYVSRRNRIIPNLEKWVPGCGPRLIINP 325
            :|:|.||:.         |.::|:..      |..:|.||::                       
 Worm   227 VVRFVPRKTPLVNTSFEVLEKVCRQV------FHYRQKYVTK----------------------- 262

  Fly   326 KSSESVTPIYPDELPKKLPQ---YSCQ--STTMSTRNYYPGINIYTQFGDLLPSQILTLFSQFRQ 385
                .:..:||:||..:|..   ..|:  .||.|.|   .||.   ||.||...           
 Worm   263 ----GLKTLYPEELEDELSDDLLKKCRIDPTTTSIR---LGIE---QFADLAEG----------- 306

  Fly   386 WPEYGESS------FLASLENALLKLETANDEPNLEDGVTLPEEDDAEADEIIEEESPVPATTP 443
               |.|..      ||....|.|..||..:.|||     .||              .|||...|
 Worm   307 ---YNEQCIRYPGLFLYDYTNKLHNLEDLSKEPN-----ALP--------------PPVPIFAP 348

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mtTFB2NP_649971.1 AdoMet_MTases 69..309 CDD:302624 52/266 (20%)
tfbm-1NP_491242.2 ksgA 10..305 CDD:234708 75/376 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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