DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11722 and Ndufaf4

DIOPT Version :9

Sequence 1:NP_649970.1 Gene:CG11722 / 41227 FlyBaseID:FBgn0037777 Length:203 Species:Drosophila melanogaster
Sequence 2:NP_942078.1 Gene:Ndufaf4 / 362495 RGDID:735162 Length:174 Species:Rattus norvegicus


Alignment Length:180 Identity:58/180 - (32%)
Similarity:93/180 - (51%) Gaps:24/180 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 VARRANRFNVENRAHRVLEREKPTPAPKFDSNLRDMERTLELDPKFVDKLNMKDSSLDGRLKDVY 72
            :.|....||||.||.:.:.:.||:.|||..|....::..|...|:..::::.||:.|...|:|||
  Rat     5 MTRAFRNFNVEKRAEQEISKRKPSMAPKHPSTRSLLQEHLSQYPEIEEEVSRKDNKLLSLLRDVY 69

  Fly    73 VTSQDRF----IKRVQERQAAEAAADNVEQRPLPLERKTP--DDFEYGYLEPNRISPGHCTLRQA 131
            |.|:|..    :|.::.:|.             |.|.:.|  |.|:....:   |..|..|:.:|
  Rat    70 VNSKDPVPSLPVKAIEPQQQ-------------PKEFRLPIGDQFDKNIKD---IPKGKITVVEA 118

  Fly   132 LKFINDHQLDPESWPAKKIANEYKLKEPLVENILHYFKTFNMYI--PDQK 179
            |..:|:|:|.||:|.|:|||.||.|:...|.::|.||.||.:.|  |:.:
  Rat   119 LTLLNNHKLSPETWTAEKIAQEYHLELEDVNSLLKYFVTFEVKIVPPEDR 168

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11722NP_649970.1 UPF0240 1..178 CDD:284252 58/177 (33%)
Ndufaf4NP_942078.1 UPF0240 2..166 CDD:399635 57/176 (32%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 15..38 9/22 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166349215
Domainoid 1 1.000 89 1.000 Domainoid score I7666
eggNOG 1 0.900 - - E1_KOG4481
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H40928
Inparanoid 1 1.050 89 1.000 Inparanoid score I5032
OMA 1 1.010 - - QHG45530
OrthoDB 1 1.010 - - D1395543at2759
OrthoFinder 1 1.000 - - FOG0007490
OrthoInspector 1 1.000 - - otm46220
orthoMCL 1 0.900 - - OOG6_109656
Panther 1 1.100 - - LDO PTHR13338
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X5615
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1615.770

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