DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3909 and AT4G34380

DIOPT Version :10

Sequence 1:NP_649969.1 Gene:CG3909 / 41226 FlyBaseID:FBgn0027524 Length:331 Species:Drosophila melanogaster
Sequence 2:NP_195164.1 Gene:AT4G34380 / 829588 AraportID:AT4G34380 Length:495 Species:Arabidopsis thaliana


Alignment Length:342 Identity:83/342 - (24%)
Similarity:128/342 - (37%) Gaps:113/342 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 DFLVTGGLDDLVKVWDLQEDNTLKLRHKLKG-------------------------------HAL 86
            |.:.||..|..:::|.:.:....|  ||..|                               |..
plant   174 DRIFTGHQDGKIRIWKVSKRKPGK--HKRVGTLPTFKSMVKSSVNPKHFMEVRRNRNSVKTKHND 236

  Fly    87 GVVSVAVSSDGQTIASSSLDSTMCLWDARSGDKKHLLSFGPVDLWTVQFSPCNKYVISGLNDGKI 151
            .|.|:::..:...:.|||.|:|:.:|  |..|.|.|.|....|      ...|. |:||.:|   
plant   237 AVSSLSLDVELGLLYSSSWDTTIKVW--RIADSKCLESIHAHD------DAINS-VMSGFDD--- 289

  Fly   152 SMYSVETGKAEQT-------LDAQNGKYTL------------SIAYSPDGKYIASGAIDGIITIF 197
               .|.||.|:.|       |..:..|:||            ::|.......:..|:.||::..:
plant   290 ---LVFTGSADGTVKVWKRELQGKGTKHTLAQVLLKQENAVTALAVKSQSSIVYCGSSDGLVNYW 351

  Fly   198 DVA----AGKVVQTLEGHAMPVRSLCFSPNSQLLLTASDDGHMKLY-----DVTHSDVVGTLSGH 253
            :.:    .|.:   |:||...|  ||......|||:.|.|.::.::     |.:| ..:..|:||
plant   352 ERSKRSFTGGI---LKGHKSAV--LCLGIAGNLLLSGSADKNICVWRRDPSDKSH-QCLSVLTGH 410

  Fly   254 ASWVLCVAFSE---------------DGKHFA-SSSSDNSVKIWDTSERKCLHTFAEHTDQVWGV 302
            ...|.|:|..|               |.|... |.|.|.|||:|..|||  :.|:.|        
plant   411 MGPVKCLAVEEERACHQGAKASVAEGDRKWIIYSGSLDKSVKVWRVSER--MATWKE-------- 465

  Fly   303 RYSPGNDKVASASEDKS 319
                 .|:.|::||.||
plant   466 -----MDEPAASSERKS 477

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3909NP_649969.1 WD40 <54..323 CDD:441893 82/341 (24%)
WD40 repeat 89..127 CDD:293791 12/37 (32%)
WD40 repeat 130..166 CDD:293791 10/42 (24%)
WD40 repeat 174..209 CDD:293791 6/50 (12%)
WD40 repeat 215..251 CDD:293791 10/40 (25%)
WD40 repeat 257..293 CDD:293791 17/51 (33%)
WD40 repeat 299..323 CDD:293791 6/21 (29%)
AT4G34380NP_195164.1 WD40 125..455 CDD:238121 71/303 (23%)
WD40 repeat 131..161 CDD:293791
WD40 repeat 166..205 CDD:293791 9/32 (28%)
WD40 repeat 239..274 CDD:293791 12/36 (33%)
WD40 repeat 280..319 CDD:293791 14/45 (31%)
WD40 repeat 327..364 CDD:293791 5/39 (13%)
WD40 repeat 370..392 CDD:293791 8/23 (35%)
Blue background indicates that the domain is not in the aligned region.

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